Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics10
    • Transcriptome10
    • Transcriptomics10
    • Assembly4
    • Biological sequences4
    • MicroRNA sequencing4
    • R4
    • R program4
    • R script4
    • RNA sequencing4
    • RNA-Seq4
    • RNA-Seq analysis4
    • Sequence analysis4
    • Sequence assembly4
    • Sequence databases4
    • Small RNA sequencing4
    • Small RNA-Seq4
    • Small-Seq4
    • Transcriptome profiling4
    • WTSS4
    • Whole transcriptome shotgun sequencing4
    • miRNA-seq4
    • Antimicrobial stewardship3
    • Exomes3
    • Genome annotation3
    • Genomes3
    • Genomics3
    • Medical microbiology3
    • Microbial genetics3
    • Microbial physiology3
    • Microbial surveillance3
    • Microbiological surveillance3
    • Microbiology3
    • Molecular infection biology3
    • Molecular microbiology3
    • Personal genomics3
    • Synthetic genomics3
    • Viral genomics3
    • Whole genomes3
    • DNA variation2
    • Epigenomics2
    • Genetic variation2
    • Genomic variation2
    • Mutation2
    • Polymorphism2
    • Single-cell genomics2
    • Single-cell sequencing2
    • Somatic mutations2
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • DNA polymorphism1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Microsatellites1
    • Protein families1
    • Protein sequence classification1
    • RFLP1
    • SNP1
    • Single nucleotide polymorphism1
    • Synteny1
    • VNTR1
    • Variable number of tandem repeat polymorphism1
    • snps1
    • Show N_FILTERS more
    • Tool
    • Galaxy20
    • FastQC5
    • SAMtools4
    • BEDTools3
    • BWA3
    • Cutadapt2
    • DeepTools2
    • JBrowse2
    • MultiQC2
    • RSeQC2
    • bx-python2
    • BamTools1
    • Bandage1
    • Circos1
    • DESeq21
    • FASTQE1
    • FASTX-Toolkit1
    • Falco1
    • FeatureCounts1
    • FreeBayes1
    • GOEnrichment1
    • GOseq1
    • Galactic Circos1
    • HISAT21
    • Heinz1
    • NanoPlot1
    • QUAST1
    • R1
    • SPAdes1
    • Subread1
    • Trimmomatic1
    • VelvetOptimiser1
    • annotatemyids1
    • compute_sequence_length1
    • ggplot21
    • lofreq1
    • pathview1
    • pycoQC1
    • snippy1
    • Show N_FILTERS more
    • Content provider
    • GTN23
    • Glittr.org9
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics10
    • R7
    • español5
    • Introduction to Galaxy Analyses4
    • RNA-seq4
    • deutsch4
    • italiano4
    • Assembly3
    • QC3
    • collections3
    • gmod3
    • jbrowse13
    • microgalaxy3
    • prokaryote3
    • ChIP-seq2
    • Epigenetics2
    • Sequence analysis2
    • Single-cell sequencing2
    • Using Galaxy and Managing your Data2
    • Variant Analysis2
    • mouse2
    • Galaxy Server administration1
    • Genome Annotation1
    • Unix/Linux1
    • bulk1
    • cyoa1
    • drosophila1
    • limma-voom1
    • metatranscriptomics1
    • network analysis1
    • rna-seq1
    • work-in-progress1
    • workflows1
    • Show N_FILTERS more
    • Competency level
    • Beginner22
    • Not specified9
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International23
    • License Not Specified8
    • MIT License1
    • Show N_FILTERS more
    • Target audience
    • Students22
    • Galaxy Administrators1
    • Show N_FILTERS more
    • Author
    • Helena Rasche6
    • Bérénice Batut5
    • Maria Doyle5
    • Anton Nekrutenko4
    • Nicola Soranzo4
    • Simon Gladman4
    • Anika Erxleben3
    • Anna Syme3
    • Björn Grüning3
    • Clemens Blank3
    • The Carpentries Incubator3
    • Anne Pajon2
    • Belinda Phipson2
    • Dave Clements2
    • Harriet Dashnow2
    • Joachim Wolff2
    • Mallory Freeberg2
    • Mo Heydarian2
    • Saskia Hiltemann2
    • Torsten Seemann2
    • Vivek Bhardwaj2
    • Aedin Culhane1
    • Alexandre Cormier1
    • Andrea Bagnacani1
    • Anna Trigos1
    • Anthony Bretaudeau1
    • Cameron Hyde1
    • Chao Zhang1
    • Charity Law1
    • Cristóbal Gallardo1
    • Delphine Lariviere1
    • Dilmurat Yusuf1
    • Erwan Corre1
    • Fidel Ramirez1
    • Friederike Dündar1
    • IGC Bioinformatics Unit1
    • Jovana Maksimovic1
    • Laura Leroi1
    • Lucille Delisle1
    • Martin Čech1
    • Matt Ritchie1
    • Melbourne Bioinformatics1
    • Nick Stoler1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Sarah Peter1
    • Saskia1
    • Shian Su1
    • Software Carpentry1
    • Stefano Mangiola1
    • Stéphanie Robin1
    • Tidy-transcriptomics workshops1
    • Show N_FILTERS more
    • Contributor
    • Maria Doyle
    • Saskia Hiltemann592
    • Helena Rasche501
    • Björn Grüning420
    • Bérénice Batut261
    • Nicola Soranzo179
    • Martin Čech128
    • Anthony Bretaudeau107
    • Cristóbal Gallardo104
    • Niall Beard90
    • Toby Hodges79
    • Wendi Bacon77
    • Nate Coraor70
    • François Michonneau67
    • Armin Dadras64
    • Gildas Le Corguillé63
    • Erin Becker61
    • Marius van den Beek60
    • William Durand59
    • Zhian N. Kamvar58
    • Mine Cetinkaya-Rundel56
    • Robert Andrews55
    • Simon Gladman54
    • Tracy Teal53
    • Katrin Leinweber52
    • Raniere Silva52
    • W. Trevor King50
    • maneesha50
    • Andy Boughton49
    • Beatriz Serrano-Solano48
    • Teresa Müller48
    • Katie Anne Mills47
    • Lucille Delisle46
    • Maxim Belkin46
    • Mehmet Tekman46
    • Yvan Le Bras45
    • Canadian Bioinformatics Workshops43
    • Munazah Andrabi43
    • David Pérez-Suárez42
    • Gabriel A. Devenyi42
    • Abby Cabunoc Mayes41
    • EvanWill41
    • Ian Lee41
    • Jon Pipitone41
    • Jonah Duckles41
    • Michael Hansen41
    • Piotr Banaszkiewicz41
    • Brandon Curtis40
    • David Mawdsley40
    • Greg Wilson40
    • Jemma Stachelek40
    • Pavankumar Videm40
    • Remi Rampin40
    • Allen Lee39
    • Andrew Sanchez39
    • Michael R. Crusoe39
    • James Allen38
    • Jeff Oliver38
    • Joel Nothman38
    • Nick Young38
    • Rémi Emonet38
    • naught10138
    • Rayna M Harris37
    • William L. Close37
    • Marie Josse36
    • Wolfgang Maier36
    • Melanie Föll35
    • Sarah Brown35
    • Anup Kumar32
    • Gerard Capes32
    • trk30
    • Ana Conrado29
    • Stephan Druskat29
    • K.E. Koziar28
    • Simon Bray28
    • Subina Mehta28
    • Alex Whan27
    • Renato Alves27
    • Christina K.26
    • Paula Andrea Martinez26
    • Anne Fouilloux25
    • Michael Joseph25
    • Anthony Gitter24
    • Donny Vrins24
    • João Rodrigues24
    • Geert van Geest23
    • Peter van Heusden23
    • Sarah Stevens21
    • Wolmar Nyberg Åkerström21
    • actions-user21
    • Henry Schreiner20
    • Hilmar Lapp20
    • Julia Jakiela20
    • Robert Davey20
    • Bazante Sanders19
    • Leonid Kostrykin19
    • The Gulbenkian Training Programme in Bioinformatics19
    • Anton Nekrutenko18
    • Elin Kronander18
    • Niclas Jareborg18
    • Show N_FILTERS more
    • Resource type
    • e-learning22
    • slides1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets20
    • Associated Workflows19
    • Show N_FILTERS more
    • Node
    • Switzerland9
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Hide archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Contributors: Maria Doyle

and Include archived: true

32 materials found
  • slides

    Advanced customisation of a Galaxy instance

    • Beginner
    Galaxy Server administration
  • aedin/scRNAseqBasicWorkflow

    ELIXIR node event
    Transcriptomics Single-cell sequencing RNA-Seq Single-cell sequencing Transcriptomics RNA-seq
  • SaskiaFreytag/biocommons-r-intro

    ELIXIR node event
    R script R
  • melbournebioinformatics/r-intro-biologists

    ELIXIR node event
    R script R
  • tidytranscriptomics-workshops/bioc2022_tidytranscriptomics

    ELIXIR node event
    Transcriptomics Single-cell sequencing RNA-Seq Single-cell sequencing R RNA-seq Transcriptomics
  • carpentries-incubator/bioc-rnaseq

    ELIXIR node event
    Transcriptomics RNA-Seq Transcriptomics RNA-seq R
  • carpentries-incubator/bioc-project

    ELIXIR node event
    R script R
  • carpentries-incubator/bioc-intro

    ELIXIR node event
    R script R
  • stemangiola/bioc_2020_tidytranscriptomics

    ELIXIR node event
    Transcriptomics RNA-Seq Transcriptomics RNA-seq R
  • swcarpentry/shell-novice

    ELIXIR node event
    Unix/Linux
  • 1
  • 2
  • 3
  • 4
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.