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Tools: Galaxy

and Contributors: Mehmet Tekman

and Resource type: e-learning

31 e-learning materials found
  • e-learning

    Converting NCBI Data to the AnnData Format

    • Beginner
    Single Cell data import data management sc_formats
  • e-learning

    Converting between common single cell data formats

    • Beginner
    Single Cell data import data management sc_formats
  • e-learning

    Importing files from public atlases

    • Beginner
    Single Cell data import data management sc_formats
  • e-learning

    Inferring single cell trajectories with Scanpy

    • Beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Scanpy Parameter Iterator

    • Beginner
    Single Cell single-cell
  • e-learning

    Pre-processing of 10X Single-Cell ATAC-seq Datasets

    • Beginner
    10x Single Cell epigenetics
  • e-learning

    Removing the effects of the cell cycle

    • Beginner
    Drop-seq Single Cell
  • e-learning

    Comparing inferred cell compositions using MuSiC deconvolution

    • Beginner
    Single Cell deconvolution transcriptomics
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • Beginner
    Single Cell data management deconvolution transcriptomics
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • Beginner
    Single Cell data management deconvolution
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