Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly
    • Algorithms15
    • Computer programming15
    • Data structures15
    • Programming languages15
    • Software development15
    • Software engineering15
    • Sequence assembly9
    • Biological sequences8
    • Sequence analysis8
    • Sequence databases8
    • Comparative transcriptomics7
    • Exomes7
    • Genome annotation7
    • Genomes7
    • Genomics7
    • Personal genomics7
    • Synthetic genomics7
    • Transcriptome7
    • Transcriptomics7
    • Viral genomics7
    • Whole genomes7
    • DNA variation6
    • Genetic variation6
    • Genomic variation6
    • Mutation6
    • Polymorphism6
    • Somatic mutations6
    • Antimicrobial stewardship5
    • Medical microbiology5
    • Microbial genetics5
    • Microbial physiology5
    • Microbial surveillance5
    • Microbiological surveillance5
    • Microbiology5
    • Molecular infection biology5
    • Molecular microbiology5
    • Biodiversity4
    • Bottom-up proteomics4
    • Discovery proteomics4
    • Epigenomics4
    • MS-based targeted proteomics4
    • MS-based untargeted proteomics4
    • Metaproteomics4
    • Peptide identification4
    • Protein and peptide identification4
    • Proteomics4
    • Quantitative proteomics4
    • Targeted proteomics4
    • Top-down proteomics4
    • Computational ecology3
    • Ecoinformatics3
    • Ecological informatics3
    • Ecology3
    • Ecosystem science3
    • Taxonomy3
    • Community analysis2
    • DNA metabarcoding2
    • DNA polymorphism2
    • Environmental metabarcoding2
    • Environmental microbiology2
    • Metabarcoding2
    • Metagenomics2
    • Microbial ecology2
    • Microbiome2
    • Microsatellites2
    • Molecular community analysis2
    • RFLP2
    • RNA metabarcoding2
    • SNP2
    • Shotgun metagenomics2
    • Single nucleotide polymorphism2
    • VNTR2
    • Variable number of tandem repeat polymorphism2
    • eDNA metabarcoding2
    • eRNA metabarcoding2
    • snps2
    • Bayesian methods1
    • Biostatistics1
    • ChIP-exo1
    • ChIP-seq1
    • ChIP-sequencing1
    • Chip Seq1
    • Chip sequencing1
    • Chip-sequencing1
    • Descriptive statistics1
    • Gaussian processes1
    • Gene and protein families1
    • Gene families1
    • Gene family1
    • Gene system1
    • Genes, gene family or system1
    • Genetic linkage1
    • Inferential statistics1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Markov processes1
    • Multivariate statistics1
    • Probabilistic graphical model1
    • Show N_FILTERS more
    • Tool
    • Galaxy9
    • FastQC3
    • Bandage2
    • MultiQC2
    • QUAST2
    • SPAdes2
    • Unicycler2
    • VelvetOptimiser2
    • BEDTools1
    • BWA1
    • BamTools1
    • Circos1
    • FreeBayes1
    • Galactic Circos1
    • Vcflib1
    • compute_sequence_length1
    • snippy1
    • Show N_FILTERS more
    • Content provider
    • GTN9
    • Show N_FILTERS more
    • Keyword
    • Assembly7
    • prokaryote5
    • microgalaxy4
    • Variant Analysis2
    • gmod2
    • jbrowse12
    • biodiversity1
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International9
    • Show N_FILTERS more
    • Target audience
    • Students9
    • Show N_FILTERS more
    • Author
    • Simon Gladman7
    • Anton Nekrutenko4
    • Delphine Lariviere3
    • Helena Rasche2
    • Alex Ostrovsky1
    • Anna Syme1
    • Saskia Hiltemann1
    • Torsten Seemann1
    • Show N_FILTERS more
    • Contributor
    • Niall Beard
    • Saskia Hiltemann22
    • Helena Rasche19
    • Bérénice Batut18
    • Björn Grüning17
    • Cristóbal Gallardo13
    • Anthony Bretaudeau9
    • Nicola Soranzo9
    • Deepti Varshney6
    • William Durand6
    • Delphine Lariviere5
    • Anton Nekrutenko4
    • Maria Doyle4
    • Teresa Müller4
    • Tristan Reynolds4
    • Alexandre Cormier3
    • Anna Syme3
    • Gildas Le Corguillé3
    • Paul Zierep3
    • Simon Gladman3
    • Bazante Sanders2
    • Erwan Corre2
    • Laura Leroi2
    • Miaomiao Zhou2
    • Nate Coraor2
    • Solenne Correard2
    • Wolfgang Maier2
    • Alex Ostrovsky1
    • Anne Fouilloux1
    • Engy Nasr1
    • Enis Afgan1
    • Hans-Rudolf Hotz1
    • Jennifer Hillman-Jackson1
    • Matúš Kalaš1
    • Mélanie Petera1
    • Natalie Whitaker-Allen1
    • Peter van Heusden1
    • Polina Polunina1
    • Romane LIBOUBAN1
    • Saim Momin1
    • Stéphanie Robin1
    • Tom Brown1
    • Verena Moosmann1
    • Vijay1
    • Yvan Le Bras1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning6
    • slides3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets9
    • Associated Workflows9
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Scientific topics: Assembly

and Competency level: Beginner

and Contributors: Niall Beard

9 materials found
  • e-learning

    Microbial Variant Calling

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy …
  • e-learning

    Calling variants in non-diploid systems

    • Beginner
    Genetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote
  • e-learning

    Making sense of a newly assembled genome

    • Beginner
    Sequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote
  • e-learning

    Unicycler Assembly

    • Beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • e-learning

    An Introduction to Genome Assembly

    • Beginner
    Sequence assembly Assembly
  • e-learning

    De Bruijn Graph Assembly

    • Beginner
    Sequence assembly Assembly
  • slides

    Unicycler Assembly

    • Beginner
    Sequence assembly Assembly prokaryote
  • slides

    An Introduction to Genome Assembly

    • Beginner
    Sequence assembly Assembly
  • slides

    De Bruijn Graph Assembly

    • Beginner
    Sequence assembly Assembly
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.