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Tools: Galaxy

and Competency level: Beginner

and Contributors: Pablo Moreno

11 materials found
  • e-learning

    GO Enrichment Analysis on Single-Cell RNA-Seq Data

    • Beginner
    GO enrichment Single Cell single cell
  • e-learning

    Converting NCBI Data to the AnnData Format

    • Beginner
    Single Cell data import data management
  • e-learning

    Converting between common single cell data formats

    • Beginner
    Single Cell data import data management
  • e-learning

    Importing files from public atlases

    • Beginner
    Single Cell data import data management
  • e-learning

    Filter, plot, and explore single cell RNA-seq data with Seurat

    • Beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution

    • Beginner
    Single Cell data management transcriptomics
  • e-learning

    Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution

    • Beginner
    Single Cell data management
  • e-learning

    Inferring single cell trajectories with Monocle3

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Combining single cell datasets after pre-processing

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Creating content in Markdown

    • Beginner
    Contributing to the Galaxy Training Material
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