Training materials
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e-learning
Remove contamination and host reads
• BeginnerMetagenomics Microbial ecology Microbiome host-removal metagenomics microgalaxy preprocessing -
e-learning
MGnify v5.0 Amplicon Pipeline
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome amplicon microbiome taxonomic abundance taxonomy -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• BeginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis … -
e-learning
Metatranscriptomics analysis using microbiome RNA-seq data
• BeginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy -
e-learning
Metatranscriptomics analysis using microbiome RNA-seq data (short)
• BeginnerMetagenomics Microbial ecology Metatranscriptomics Taxonomy Function analysis Sequence analysis Microbiome metatranscriptomics microgalaxy