Training materials
Contributors: Pavankumar Videm
and Competency level: Intermediate
and Related resources: Associated Workflows
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ELIXIR TeSS
e-learning
Content Tracking and Verification in Galaxy Workflows with ISCC-SUM
•• IntermediateImaging Data handling Data management Data sharing Imaging Validation -
ELIXIR TeSS
e-learning
Molecular formula assignment and mass recalibration with MFAssignR package
•• IntermediateMetabolomics Metabolomics exposomics gc-ms lc-ms metabolomics -
ELIXIR TeSS
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• Intermediate10x Single Cell epigenetics single-cell -
ELIXIR TeSS
e-learning
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• IntermediateMetabolomics Metabolomics exposomics gc-ms metabolomics -
ELIXIR TeSS
e-learning
MaxQuant and MSstats for the analysis of label-free data
•• IntermediateProteomics Proteomics label-free -
ELIXIR TeSS
e-learning
Mass spectrometry imaging: Finding differential analytes
•• IntermediateMetabolomics Metabolomics imaging mass spectrometry imaging metabolomics -
ELIXIR TeSS
e-learning
Protein-ligand docking
•• IntermediateComputational chemistry Computational chemistry computational-chemistry