Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Tool
    • BWA
    • Galaxy30
    • SCANPY9
    • Falco6
    • MultiQC5
    • anndata5
    • Trim Galore4
    • BEDTools3
    • DESeq23
    • DeepTools3
    • DropletUtils3
    • FastQC3
    • MACS3
    • Salmon3
    • Biopython2
    • RSeQC2
    • RStudio2
    • SAMtools2
    • STAR2
    • Targetfinder.org2
    • miRDeep22
    • Alevin1
    • BamTools1
    • Bowtie 21
    • FeatureCounts1
    • GOseq1
    • IDR1
    • IsoformSwitchAnalyzeR1
    • JBrowse 21
    • MEME1
    • MethylDackel1
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC1
    • PfamScan1
    • R1
    • SeqCode1
    • Seurat1
    • StringTie1
    • UCSC Genome Browser Utilities1
    • annotatemyids1
    • blockbuster1
    • compute_sequence_length1
    • edgeR1
    • epiScanpy1
    • fastp1
    • gffcompare1
    • gffread1
    • ggplot21
    • pathview1
    • pyGenomeTracks1
    • rnaQUAST1
    • scp1
    • Show N_FILTERS more
    • Content provider
    • GTN2
    • Show N_FILTERS more
    • Keyword
    • 10x2
    • Single Cell2
    • epigenetics2
    • single-cell1
    • Show N_FILTERS more
    • Competency level
    • Beginner1
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Show N_FILTERS more
    • Target audience
    • Students2
    • Show N_FILTERS more
    • Author
    • Pavankumar Videm1
    • Timon Schlegel1
    • Show N_FILTERS more
    • Contributor
    • Pavankumar Videm
    • Helena Rasche13
    • Björn Grüning12
    • Saskia Hiltemann11
    • Bérénice Batut10
    • Niall Beard7
    • Nicola Soranzo7
    • William Durand6
    • Wolfgang Maier5
    • Armin Dadras4
    • Anthony Bretaudeau3
    • Anton Nekrutenko3
    • Maria Doyle3
    • Martin Čech3
    • Teresa Müller3
    • Verena Moosmann3
    • Cristóbal Gallardo2
    • Gildas Le Corguillé2
    • Mehmet Tekman2
    • Simon Gladman2
    • Timon Schlegel2
    • Wendi Bacon2
    • Alex Ostrovsky1
    • Alexandre Cormier1
    • Anna Syme1
    • Ava Hoffman1
    • Beatriz Serrano-Solano1
    • Candace Savonen1
    • Dave Clements1
    • Deepti Varshney1
    • Delphine Lariviere1
    • Ekaterina Polkh1
    • Elizabeth Humphries1
    • Fidel Ramirez1
    • Frederick Tan1
    • Friederike Dündar1
    • John Davis1
    • Katarzyna Kamieniecka1
    • Katherine Cox1
    • Khaled Jum'ah1
    • Mallory Freeberg1
    • Marie Josse1
    • Marisa Loach1
    • Mateo Boudet1
    • Mélanie Petera1
    • Natalie Kucher1
    • Nate Coraor1
    • TheKharleeci1
    • Tristan Reynolds1
    • Vijay1
    • Yvan Le Bras1
    • Show N_FILTERS more
    • Resource type
    • e-learning2
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets
    • Associated Workflows2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: BWA

and Contributors: Pavankumar Videm

and Related resources: Associated Training Datasets

2 materials found
  • e-learning

    Single-cell ATAC-seq standard processing with SnapATAC2

    •• Intermediate
    10x Single Cell epigenetics single-cell
  • e-learning

    Pre-processing of 10X Single-Cell ATAC-seq Datasets

    • Beginner
    10x Single Cell epigenetics
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.