Training materials
-
e-learning
MGnify v5.0 Amplicon Pipeline
• BeginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome amplicon microbiome taxonomic abundance taxonomy -
e-learning
Phylodiversity analysis quick tutorial
• BeginnerEcology Biodiversity Ecology biodiversity ecology phylodiversity taxonomic data -
e-learning
Taxonomic Analysis of eDNA
• BeginnerEcology Biodiversity Ecology biodiversity metabarcoding -
e-learning
Life Traits Ecoregionalization workflow
• BeginnerEcology Biodiversity Ecology biodiversity ecoregions life traits -
e-learning
RNA-Seq data analysis, clustering and visualisation tutorial
• BeginnerTranscriptomics PCA Transcriptomics bulk clustering collections mouse rna-seq work-in-progress -
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• BeginnerImaging Image segmentation Imaging Parameter optimisation Validation -
slides
Genome assembly and assembly QC - Introduction short version
• BeginnerSequence assembly Assembly -
e-learning
Collaboration with JupyterGIS
• BeginnerClimate -
e-learning
Identification and Evolutionary Analysis of Transcription-Associated Proteins in Streptophyte algae and Land plants
• BeginnerSequence analysis Sequence analysis plants -
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• BeginnerImaging IDR dataset Imaging Overlay Rasterisation Spot detection