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Competency level
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Licence
- Creative Commons Attribution 4.0 International22
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Target audience
- Students22
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Author
- Bérénice Batut15
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Contributor
- Saskia Hiltemann
- Bérénice Batut17
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- Paul Zierep12
- Cristóbal Gallardo6
- Deepti Varshney5
- Natalie Whitaker-Allen4
- Teresa Müller4
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- William Durand3
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- Clea Siguret1
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- Giuseppe Defazio1
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- Matthias Bernt1
- Nate Coraor1
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- Nuwan Goonasekera1
- Polina Polunina1
- Santino Faack1
- Siyu Chen1
- Sophia Hampe1
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- Sujai Kumar1
- Tarnima Omara1
- Vini Salazar1
- Wolfgang Maier1
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Resource type
- e-learning20
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Related resource
- Associated Training Datasets20
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