Training materials
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ELIXIR TeSS
e-learning
Creating an Official Gene Set
• BeginnerGenomics Genome Annotation apollo2 gmod work-in-progress -
ELIXIR TeSS
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
ELIXIR TeSS
e-learning
Secondary metabolite discovery
• BeginnerGenomics Genome Annotation -
ELIXIR TeSS
slides
Introduction to Genome Annotation
•• IntermediateGenomics Genome Annotation -
ELIXIR TeSS
e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
ELIXIR TeSS
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• IntermediateGenomics Genome Annotation eukaryote -
ELIXIR TeSS
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
ELIXIR TeSS
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• IntermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
ELIXIR TeSS
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
ELIXIR TeSS
e-learning
Calling variants in non-diploid systems
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote