- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Community analysis6
- Environmental microbiology6
- Metagenomics6
- Microbial ecology6
- Microbiome6
- Molecular community analysis6
- Shotgun metagenomics6
- Comparative transcriptomics5
- Transcriptome5
- Transcriptomics5
- Assembly4
- Biological sequences4
- Sequence analysis4
- Sequence assembly4
- Sequence databases4
- Taxonomy4
- Biodiversity2
- DNA variation2
- Exomes2
- Function analysis2
- Functional analysis2
- Genetic variation2
- Genome annotation2
- Genomes2
- Genomic variation2
- Genomics2
- Metatranscriptomics2
- Mutation2
- Personal genomics2
- Polymorphism2
- Protein function analysis2
- Protein function prediction2
- Somatic mutations2
- Synthetic genomics2
- Viral genomics2
- Whole genomes2
- Computational ecology1
- Disease1
- Ecoinformatics1
- Ecological informatics1
- Ecology1
- Ecosystem science1
- Epidemiology1
- Epigenomics1
- Pathology1
- Public health1
- Public health and epidemiology1
- Show N_FILTERS more
-
-
-
Tool
- MultiQC
- Galaxy320
- FastQC31
- SAMtools25
- BWA17
- BEDTools15
- fastp15
- scikit-learn14
- JBrowse13
- Cutadapt12
- DeepTools12
- SCANPY12
- BLAST11
- Falco11
- QUAST11
- GEMINI10
- Galaxy Image Analysis10
- ggplot210
- taxonomy_krona_chart10
- BUSCO9
- NanoPlot9
- Trimmomatic9
- scikit-image9
- Bandage8
- FASTX-Toolkit8
- FreeBayes8
- BamTools7
- STAR7
- seqtk7
- BCFtools6
- HISAT26
- Workflow4Metabolomics6
- msConvert6
- Biopython5
- Flye5
- Galactic Circos5
- MetaPhlAn5
- Minimap25
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- Open Babel5
- RStudio5
- Unicycler5
- annotatemyids5
- kraken25
- xcms5
- Bowtie 24
- Bwa-mem24
- Diamond4
- KrakenTools4
- MAFFT4
- MaxQuant4
- Merqury4
- RSeQC4
- SRA Software Toolkit4
- Trim Galore4
- anndata4
- bx-python4
- compute_sequence_length4
- gffread4
- mothur4
- snpEff4
- Apollo3
- Bracken3
- Cardinal3
- CellProfiler3
- Clustal 1.8 (Clustal W, Clustal X)3
- DESeq23
- DropletUtils3
- GOseq3
- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- MACS3
- Newick Utilities3
- QualiMap3
- RDKit3
- Salmon3
- SeqCode3
- SortMeRNA3
- Stacks3
- StringTie3
- The Protein Data Bank (PDB)3
- UCSC Genome Browser Utilities3
- export2graphlan3
- gfastats3
- gffcompare3
- humann3
- lofreq3
- snippy3
- Bakta2
- Bio3D2
- COMBAT-TB Workbench2
- ChIPpeakAnno2
- Circos2
- Combine Metaphlan and HUMAnN2
- FASTQE2
- FeatureCounts2
- GECKO2
- GOEnrichment2
- Gromacs2
- Show N_FILTERS more
-
-
-
Content provider
- GTN21
- Show N_FILTERS more
-
-
-
Keyword
- Microbiome6
- Transcriptomics4
- microgalaxy4
- Assembly3
- Introduction to Galaxy Analyses2
- Variant Analysis2
- biodiversity2
- cyoa2
- metatranscriptomics2
- plants2
- 10x1
- CRISPR1
- Ecology1
- Epigenetics1
- Genome Annotation1
- Heatmap1
- Nanopore data analysis1
- Pathogens detection1
- Phylogenetic tree1
- QC1
- Single Cell1
- alternative splicing1
- amplicon1
- assembly1
- bulk1
- cell line1
- collections1
- essential genes1
- genome editing1
- host-removal1
- isoform switching1
- metagenomics1
- miRNA1
- microbiome1
- mouse1
- nanopore1
- polishing1
- preprocessing1
- rna-seq1
- stress tolerance1
- taxonomic abundance1
- taxonomy1
- viz1
- Show N_FILTERS more
-
-
-
Competency level
- Beginner19
- Advanced1
- Intermediate1
- Show N_FILTERS more
-
-
-
Target audience
- Students21
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut5
- Saskia Hiltemann4
- Pavankumar Videm3
- Pratik Jagtap3
- Subina Mehta3
- Anton Nekrutenko2
- Cristóbal Gallardo2
- Daniel Blankenberg2
- Emma Leith2
- Engy Nasr2
- Maria Doyle2
- Paul Zierep2
- Praveen Kumar2
- Ray Sajulga2
- Simon Gladman2
- Wolfgang Maier2
- Anika Erxleben1
- Anna Syme1
- Beatriz Serrano-Solano1
- Belinda Phipson1
- Björn Grüning1
- Dave Clements1
- David Salgado1
- Florian Heyl1
- Hans-Rudolf Hotz1
- Harriet Dashnow1
- Helena Rasche1
- Iacopo Cristoferi1
- Katarzyna Kamieniecka1
- Kenji Fujihara1
- Khaled Jum'ah1
- Krzysztof Poterlowicz1
- Lucille Delisle1
- Marek Ostaszewski1
- Marius van den Beek1
- Matti Hoch1
- Mehmet Tekman1
- Mina Hojat Ansari1
- Myrthe van Baardwijk1
- Najat Amoukou1
- Rand Zoabi1
- Torsten Houwaart1
- Twishi Gulati1
- Yvan Le Bras1
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann
- Helena Rasche21
- Björn Grüning17
- Bérénice Batut13
- Cristóbal Gallardo10
- Wolfgang Maier8
- Nicola Soranzo5
- Paul Zierep5
- Pavankumar Videm5
- Niall Beard4
- Lucille Delisle3
- Mehmet Tekman3
- William Durand3
- Anna Syme2
- Anton Nekrutenko2
- Armin Dadras2
- Beatriz Serrano-Solano2
- Christine Oger2
- Deepti Varshney2
- Engy Nasr2
- Gildas Le Corguillé2
- Hans-Rudolf Hotz2
- Maria Doyle2
- Nate Coraor2
- Simon Gladman2
- Teresa Müller2
- Verena Moosmann2
- Anthony Bretaudeau1
- Antonia Taiani1
- Clea Siguret1
- Donny Vrins1
- Ekaterina Polkh1
- Florian Heyl1
- John Davis1
- José Manuel Domínguez1
- Katarzyna Kamieniecka1
- Khaled Jum'ah1
- Linelle Abueg1
- Marie Josse1
- Martin Čech1
- Matti Hoch1
- Mira Kuntz1
- Natalie Whitaker-Allen1
- Pauline Seguineau1
- Sanjay Kumar Srikakulam1
- Subina Mehta1
- Vini Salazar1
- Wendi Bacon1
- Yvan Le Bras1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning19
- slides2
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets20
- Associated Workflows19
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Show archived materials