Training materials
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ELIXIR TeSS
e-learning
Using BioImage.IO models for image analysis in Galaxy
•• IntermediateImaging Deep learning Image annotation Image segmentation Imaging -
ELIXIR TeSS
e-learning
Identification and Evolutionary Analysis of Transcription-Associated Proteins in Streptophyte algae and Land plants
• BeginnerSequence analysis Sequence analysis plants -
ELIXIR TeSS
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• BeginnerImaging IDR dataset Imaging Overlay Rasterisation Spot detection -
ELIXIR TeSS
e-learning
Genome annotation with Braker3
•• IntermediateGenomics Sequence assembly Biodiversity Zoology Plant biology Braker3 Genome Annotation biodiversity eukaryota jbrowse1 -
ELIXIR TeSS
e-learning
Dataset construction for bacterial comparative genomics
• BeginnerGenomics Microbiology Genome Annotation microgalaxy work-in-progress -
ELIXIR TeSS
e-learning
Multiomics data analysis using MultiGSEA
• BeginnerProteomics Proteomics metabolomics multi-omics proteomics transcriptomics -
ELIXIR TeSS
e-learning
Multi-sample batch correction with Harmony and SnapATAC2
•• Intermediate10x Single Cell epigenetics -
ELIXIR TeSS
e-learning
Text-Mining Differences in Chinese Newspaper Articles
•• IntermediateStatistics and probability Digital Humanities text mining -
ELIXIR TeSS
e-learning
Pseudobulk Analysis with Decoupler and EdgeR
• BeginnerSingle Cell pseudobulk transcriptomics -
ELIXIR TeSS
e-learning
Neoantigen 1b: Non-Reference-Database-Generation
• BeginnerProteomics Proteomics label-free