Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Antimicrobial stewardship2
    • Biological sequences2
    • Communicable disease2
    • Epidemiology2
    • Exomes2
    • Genome annotation2
    • Genomes2
    • Genomics2
    • Infectious disease2
    • Medical microbiology2
    • Microbial genetics2
    • Microbial physiology2
    • Microbial surveillance2
    • Microbiological surveillance2
    • Microbiology2
    • Molecular infection biology2
    • Molecular microbiology2
    • Personal genomics2
    • Public health2
    • Public health and epidemiology2
    • Sequence analysis2
    • Sequence databases2
    • Synthetic genomics2
    • Transmissible disease2
    • Viral genomics2
    • Whole genomes2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Assembly1
    • DNA variation1
    • De novo genome sequencing1
    • Extensive drug resistance (XDR)1
    • Genetic linkage1
    • Genetic variation1
    • Genome sequencing1
    • Genomic variation1
    • Linkage1
    • Linkage mapping1
    • Mapping1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Mutation1
    • Pandrug resistance (PDR)1
    • Polymorphism1
    • Sequence assembly1
    • Somatic mutations1
    • Synteny1
    • Total drug resistance (TDR)1
    • WGS1
    • Whole genome resequencing1
    • Whole genome sequencing1
    • Show N_FILTERS more
    • Tool
    • JBrowse
    • Galaxy15
    • FastQC4
    • Bandage3
    • Bracken3
    • QUAST3
    • SAMtools3
    • BEDTools2
    • DeepTools2
    • Falco2
    • Flye2
    • Newick Utilities2
    • Recentrifuge2
    • mothur2
    • taxonomy_krona_chart2
    • BCFtools1
    • BUSCO1
    • BWA1
    • Bakta1
    • BamTools1
    • Bowtie 21
    • Bwa-mem21
    • COMBAT-TB Workbench1
    • Filtlong1
    • HiCExplorer1
    • JBrowse 21
    • Jvarkit1
    • KrakenTools1
    • MACS1
    • MetaPhlAn1
    • NanoPlot1
    • Polypolish1
    • QualiMap1
    • SPAdes1
    • SeqCode1
    • Trim Galore1
    • UCSC Genome Browser Utilities1
    • Unicycler1
    • VelvetOptimiser1
    • fastp1
    • kraken21
    • pilon1
    • pyGenomeTracks1
    • shovill1
    • snippy1
    • staramr1
    • tbl2gff31
    • Show N_FILTERS more
    • Content provider
    • GTN3
    • Show N_FILTERS more
    • Keyword
    • microgalaxy2
    • one-health2
    • Genome Annotation1
    • Sequence analysis1
    • Variant Analysis1
    • amr1
    • deutsch1
    • español1
    • gmod1
    • illumina1
    • italiano1
    • jbrowse11
    • prokaryote1
    • tuberculosis1
    • Show N_FILTERS more
    • Competency level
    • Beginner2
    • Intermediate1
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International3
    • Show N_FILTERS more
    • Target audience
    • Students3
    • Show N_FILTERS more
    • Author
    • Bérénice Batut2
    • Bazante Sanders1
    • Helena Rasche1
    • Joachim Wolff1
    • Peter van Heusden1
    • Simon Gladman1
    • Thoba Lose1
    • Show N_FILTERS more
    • Contributor
    • Tristan Reynolds
    • Anthony Bretaudeau13
    • Björn Grüning13
    • Bérénice Batut13
    • Helena Rasche13
    • Saskia Hiltemann13
    • Nicola Soranzo5
    • Niall Beard4
    • Cristóbal Gallardo3
    • Anna Syme2
    • Deepti Varshney2
    • Maria Doyle2
    • Simon Bray2
    • Stéphanie Robin2
    • Teresa Müller2
    • William Durand2
    • Alexandre Cormier1
    • Anup Kumar1
    • Bazante Sanders1
    • Ekaterina Polkh1
    • Erwan Corre1
    • Felicitas Kindel1
    • Gildas Le Corguillé1
    • Jasper Ouwerkerk1
    • Jonathan Kreplak1
    • Laura Leroi1
    • Linelle Abueg1
    • Mehmet Tekman1
    • Miaomiao Zhou1
    • Mélanie Petera1
    • Paul Zierep1
    • Peter van Heusden1
    • Romane LIBOUBAN1
    • Simon Gladman1
    • Wolfgang Maier1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning3
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets3
    • Associated Workflows3
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: JBrowse

and Contributors: Tristan Reynolds

3 materials found
  • e-learning

    Identification of AMR genes in an assembled bacterial genome

    • Beginner
    Genomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod …
  • e-learning

    M. tuberculosis Variant Analysis

    •• Intermediate
    Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
  • e-learning

    Mapping

    • Beginner
    Sequence analysis Mapping Sequence analysis deutsch español italiano
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.