Training materials
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e-learning
Removing the effects of the cell cycle
• BeginnerSingle Cell -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• BeginnerSingle Cell transcriptomics -
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• BeginnerSingle Cell data management transcriptomics -
e-learning
Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• BeginnerSingle Cell data management -
e-learning
Inferring single cell trajectories with Monocle3
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
e-learning
Principles of learning and how they apply to training and teaching
• BeginnerContributing to the Galaxy Training Material elixir train-the-trainers -
e-learning
Combining single cell datasets after pre-processing
• BeginnerTranscriptomics MIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Contributing a New Feature to Galaxy Core
• BeginnerSoftware engineering Development in Galaxy -
slides
Contributing with GitHub via command-line
• BeginnerContributing to the Galaxy Training Material