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Scientific topics: Transcriptome

and Competency level: Beginner

and Contributors: Wendi Bacon

12 materials found
  • e-learning

    Inferring single cell trajectories with Monocle3

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Combining single cell datasets after pre-processing

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Inferring single cell trajectories with Scanpy (Python)

    • Beginner
    Transcriptomics MIGHTS Single Cell jupyter-notebook paper-replication
  • e-learning

    Pre-processing of 10X Single-Cell RNA Datasets

    • Beginner
    Transcriptomics 10x Single Cell
  • e-learning

    Pre-processing of Single-Cell RNA Data

    • Beginner
    Transcriptomics Single Cell work-in-progress
  • e-learning

    Analysis of plant scRNA-Seq Data with Scanpy

    • Beginner
    Transcriptomics Single Cell paper-replication plants
  • e-learning

    Clustering 3K PBMCs with Scanpy

    • Beginner
    Transcriptomics 10x Single Cell
  • e-learning

    Generating a single cell matrix using Alevin

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Filter, plot and explore single-cell RNA-seq data with Scanpy

    • Beginner
    Transcriptomics MIGHTS Single Cell paper-replication
  • e-learning

    Bulk RNA Deconvolution with MuSiC

    • Beginner
    Transcriptomics Single Cell transcriptomics
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