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Competency level: Beginner

and Target audience: Students

and Contributors: Wendi Bacon

49 materials found
  • e-learning

    Evaluating Reference Data for Bulk RNA Deconvolution

    • Beginner
    Single Cell transcriptomics
  • e-learning

    Clustering 3K PBMCs with Seurat

    • Beginner
    10x Single Cell
  • e-learning

    GO Enrichment Analysis on Single-Cell RNA-Seq Data

    • Beginner
    GO enrichment Single Cell single cell
  • slides

    Single-cell Formats and Resources

    • Beginner
    Single Cell
  • e-learning

    Converting NCBI Data to the AnnData Format

    • Beginner
    Single Cell data import data management
  • e-learning

    Converting between common single cell data formats

    • Beginner
    Single Cell data import data management
  • e-learning

    Importing files from public atlases

    • Beginner
    Single Cell data import data management
  • e-learning

    Inferring single cell trajectories with Scanpy

    • Beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Filter, plot, and explore single cell RNA-seq data with Seurat

    • Beginner
    MIGHTS Single Cell paper-replication
  • e-learning

    Generating a single cell matrix using Alevin and combining datasets (bash + R)

    • Beginner
    10x MIGHTS Single Cell jupyter-notebook paper-replication
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