Training materials
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ELIXIR TeSS
e-learning
Large genome assembly and polishing
• BeginnerSequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing -
ELIXIR TeSS
e-learning
Champs blocs indicators
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology biodiversity ecosystem EBV class marine ecosystems -
ELIXIR TeSS
e-learning
Cleaning GBIF data for the use in Ecology
• BeginnerEcology Biodiversity Ecology biodiversity data cleaning data management gbif -
ELIXIR TeSS
e-learning
Preparing genomic data for phylogeny reconstruction
• BeginnerEcology Biodiversity Ecology biodiversity data handling functional annotation phylogeny -
ELIXIR TeSS
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
ELIXIR TeSS
e-learning
Functional annotation of protein sequences
• BeginnerGenomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote -
ELIXIR TeSS
e-learning
Masking repeats with RepeatMasker
• BeginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote -
ELIXIR TeSS
e-learning
Chloroplast genome assembly
• BeginnerSequence assembly Assembly biodiversity jbrowse1 nanopore plants -
ELIXIR TeSS
e-learning
Unicycler Assembly
• BeginnerSequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote -
ELIXIR TeSS
e-learning
RAD-Seq de-novo data analysis
• BeginnerEcology Biodiversity EBV dataset EBV workflow Ecology RAD-seq biodiversity genetic composition EBV class species populations EBV class