Training materials
Competency level: Beginner
and Licence: Creative Commons Attribution 4.0 International
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ELIXIR TeSS
e-learning
RNA-Seq data analysis, clustering and visualisation tutorial
• BeginnerTranscriptomics PCA Transcriptomics bulk clustering collections mouse rna-seq work-in-progress -
ELIXIR TeSS
Tutorial, Training materials
ARC – Getting Started Guide
• BeginnerARC DataPLANT NFDI Annotated Research Context FDO FAIR digital objects FAIR Data ISA -
ELIXIR TeSS
slides
Galaxy Tabular Learner: Building a Model using Chowell clinical data
• BeginnerStatistics and probability Statistics and machine learning -
ELIXIR TeSS
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• BeginnerImaging Image segmentation Imaging Parameter optimisation Validation -
ELIXIR TeSS
slides
Genome assembly and assembly QC - Introduction short version
• BeginnerSequence assembly Assembly -
ELIXIR TeSS
e-learning
Collaboration with JupyterGIS
• BeginnerClimate -
ELIXIR TeSS
e-learning
Identification and Evolutionary Analysis of Transcription-Associated Proteins in Streptophyte algae and Land plants
• BeginnerSequence analysis Sequence analysis plants -
ELIXIR TeSS
e-learning
Exporting to Onedata remote
• BeginnerUsing Galaxy and Managing your Data storage -
ELIXIR TeSS
e-learning
Setting up a dev Onedata instance
• BeginnerSoftware engineering Development in Galaxy storage -
ELIXIR TeSS
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• BeginnerImaging IDR dataset Imaging Overlay Rasterisation Spot detection