Training materials
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ELIXIR TeSS
Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• BeginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
ELIXIR TeSS
e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• BeginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology Sequence analysis bacteria illumina microgalaxy -
ELIXIR TeSS
e-learning
Checking expected species and contamination in bacterial isolate
• BeginnerEcology Biodiversity Whole genome sequencing Genomics Microbiology Microbial ecology Ecology bacteria illumina microgalaxy -
ELIXIR TeSS
e-learning
Creating an Official Gene Set
• BeginnerGenomics Genome Annotation apollo2 gmod work-in-progress -
ELIXIR TeSS
e-learning
Genome Annotation
• BeginnerGenomics Genome Annotation prokaryote work-in-progress -
ELIXIR TeSS
e-learning
Identification of AMR genes in an assembled bacterial genome
• BeginnerGenomics Whole genome sequencing Public health and epidemiology Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
ELIXIR TeSS
e-learning
Bacterial Genome Annotation
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
ELIXIR TeSS
e-learning
ERGA post-assembly QC
• BeginnerSequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants -
ELIXIR TeSS
e-learning
Secondary metabolite discovery
• BeginnerGenomics Genome Annotation -
ELIXIR TeSS
Presentation, Recorded webinar
EOSC4Cancer cBioPortal workshop
• BeginnerGenomics Oncology Data Analysis Oncology Genomics