TeSSHub

Filter Clear filters
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month
- Scientific topic
- Algorithms20
- Computer programming20
- Data structures20
- Programming languages20
- Software development20
- Software engineering20
- Biodiversity19
- Bioinformatics17
- Bayesian methods16
- Biostatistics16
- Descriptive statistics16
- Gaussian processes16
- Inferential statistics16
- Markov processes16
- Multivariate statistics16
- Probabilistic graphical model16
- Probability16
- Statistics16
- Statistics and probability16
- Bottom-up proteomics15
- Discovery proteomics15
- MS-based targeted proteomics15
- MS-based untargeted proteomics15
- Metaproteomics15
- Peptide identification15
- Protein and peptide identification15
- Proteomics15
- Quantitative proteomics15
- Targeted proteomics15
- Top-down proteomics15
- FAIR data14
- Findable, accessible, interoperable, reusable data14
- Data mining13
- Exomes13
- Genome annotation13
- Genomes13
- Genomics13
- Pattern recognition13
- Personal genomics13
- Synthetic genomics13
- Viral genomics13
- Whole genomes13
- Diffraction experiment12
- Imaging12
- Microscopy12
- Microscopy imaging12
- Optical super resolution microscopy12
- Photonic force microscopy12
- Photonic microscopy12
- Assembly11
- Sequence assembly11
- Computational chemistry9
- Community analysis5
- Environmental microbiology5
- Metagenomics5
- Microbial ecology5
- Microbiome5
- Molecular community analysis5
- Shotgun metagenomics5
- Comparative transcriptomics4
- DNA variation4
- Data rendering4
- Data visualisation4
- Exometabolomics4
- Genetic variation4
- Genomic variation4
- LC-MS-based metabolomics4
- MS-based metabolomics4
- MS-based targeted metabolomics4
- MS-based untargeted metabolomics4
- Mass spectrometry-based metabolomics4
- Metabolites4
- Metabolome4
- Metabolomics4
- Metabonomics4
- Mutation4
- NMR-based metabolomics4
- Polymorphism4
- Somatic mutations4
- Transcriptome4
- Transcriptomics4
- Antimicrobial stewardship3
- Biomathematics3
- Computational biology3
- Mathematical biology3
- Medical microbiology3
- Microbial genetics3
- Microbial physiology3
- Microbial surveillance3
- Microbiological surveillance3
- Microbiology3
- Molecular infection biology3
- Molecular microbiology3
- Protein structure3
- Proteogenomics3
- Taxonomy3
- Theoretical biology3
- Active learning2
- Animal2
- Animal biology2
- Show N_FILTERS more
- Operation
- Data handling2
- File handling2
- File processing2
- Processing2
- Report handling2
- Utility operation2
- Data extraction1
- Data retrieval1
- Data retrieval (metadata)1
- Metadata retrieval1
- Quality control1
- Retrieval1
- Validation1
- Show N_FILTERS more
- Tool
- Galaxy78
- BUSCO7
- JBrowse7
- Galaxy Image Analysis6
- scikit-image6
- BWA5
- QUAST4
- SAMtools4
- gffread4
- ggplot24
- BCFtools3
- OMArk3
- Open Babel3
- RDKit3
- SRA Software Toolkit3
- STAR3
- msConvert3
- seqtk3
- Apollo2
- COMBAT-TB Workbench2
- CellProfiler2
- Cutadapt2
- DISEASES2
- FastQC2
- Galactic Circos2
- HISAT22
- Helixer2
- MAFFT2
- MaxQuant2
- Merqury2
- MultiQC2
- QualiMap2
- SCANPY2
- The Protein Data Bank (PDB)2
- Trimmomatic2
- UniProt2
- Workflow4Metabolomics2
- compute_sequence_length2
- dRep2
- fastp2
- iqtree2
- metaQuantome2
- snippy2
- xcms2
- AutoDock Vina1
- BEDTools1
- BLAST1
- Bakta1
- BamTools1
- Bio3D1
- Biopython1
- Bwa-mem21
- CONCOCT1
- Cardinal1
- ChEMBL1
- CheckM1
- ChemicalToolbox1
- Circos1
- Cytoscape1
- DESeq21
- Data Stewardship Wizard1
- DeepTools1
- EXTRACT1
- European Nucleotide Archive (ENA)1
- FEELnc1
- Falco1
- FastTree1
- FeatureCounts1
- FlashLFQ1
- Flye1
- Fpocket1
- FreeBayes1
- GAEVAL1
- GOseq1
- GenomeScope 2.01
- Gromacs1
- Identifiers.org1
- InterProScan (EBI)1
- Jvarkit1
- MALDIquant1
- MDAnalysis1
- MFAssignR1
- MSstats1
- MSstatsTMT1
- Matchms1
- MaxBin1
- MetaBAT 21
- Minimap21
- NCBI Resources1
- NanoPlot1
- Newick Utilities1
- Nextclade1
- ORGANISMS1
- Ontology Lookup Service1
- PhysiCell1
- PyTorch1
- RSeQC1
- RStudio1
- SALSA1
- STITCH1
- Show N_FILTERS more
- Standard database or policy
- FAIRtracks1
- STRING: functional protein association networks1
- Search Tool for Interactions of Chemicals1
- The European Genome-phenome Archive1
- Show N_FILTERS more
- Content provider
- GTN113
- ELIXIR Portugal13
- VIB Training & Conferences6
- PerMedCoE5
- ELIXIR: The Czech Republic Node2
- Novo Nordisk Foundation Center for Protein Research2
- Barcelona Supercomputing Center (BSC)1
- DTLS - Dutch Techcentre For Life Sciences1
- NanoCommons1
- Pattern Institute1
- SIB Swiss Institute of Bioinformatics1
- SciLifeLab1
- Software Sustainability Institute1
- Show N_FILTERS more
- Keyword
- jupyter-notebook22
- Foundations of Data Science17
- Proteomics16
- Statistics and machine learning15
- Imaging12
- biodiversity11
- Data mining10
- Data reuse10
- FAIR Data9
- Genome Annotation9
- Online Repository9
- ai-ml9
- elixir9
- jbrowse18
- microgalaxy8
- Computational chemistry7
- Image segmentation7
- Using Galaxy and Managing your Data7
- Assembly6
- eukaryote6
- gmod6
- Genomics5
- Large Language Model5
- Visualisation5
- covid195
- one-health5
- Metabolomics4
- Multi-channel image4
- TreatmentBank4
- Variant Analysis4
- metabolomics4
- work-in-progress4
- workflows4
- RNA-Seq3
- DIA3
- Deep learning3
- Global Biodiversity Information Facility3
- Image annotation3
- Materials Citation3
- Object feature extraction3
- Overlay3
- RNA3
- SQL3
- Scientific Collections3
- Single Cell3
- assembly3
- eukaryota3
- pacbio3
- prokaryote3
- proteogenomics3
- 10x2
- AlphaFold2
- Biological databases2
- Braker32
- Computing environment2
- Containers2
- Conversion2
- Data handling2
- Data management2
- Data sharing2
- Deep Learning2
- Evolution2
- FAIR2
- FAIR Data, Workflows, and Research2
- FAIR principles2
- Galaxy Server administration2
- HPC2
- Image Learner2
- Isolated object tracking2
- Microbiome2
- Nextflow2
- Open Data2
- Phylogenetics2
- Population Genomics2
- Python2
- R2
- ROI selection2
- Structure prediction2
- Synonimy2
- Taxonomy2
- Transcriptomics2
- VGP2
- apollo22
- bash2
- binning2
- bulk2
- collections2
- cyoa2
- epigenetics2
- exposomics2
- game2
- gc-ms2
- interactive-tools2
- kubernetes2
- lc-ms2
- linked data2
- metagenomics2
- virology2
- Statistics1
- 3D image1
- Show N_FILTERS more
- Competency level
- Intermediate
- Beginner700
- Not specified351
- Advanced22
- Show N_FILTERS more
- Licence
- Creative Commons Attribution 4.0 International
- License Not Specified54
- Creative Commons Attribution Non Commercial Share Alike 4.0 International10
- Creative Commons Attribution Share Alike 4.0 International9
- MIT License6
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International4
- GNU General Public License v3.0 only4
- Creative Commons Zero v1.0 Universal2
- Apache License 2.01
- Creative Commons Attribution No Derivatives 2.0 Generic1
- GNU General Public License v2.0 only1
- Show N_FILTERS more
- Target audience
- Students112
- Scientific community14
- Academia/ Research Institution13
- Industry13
- Non-Profit Organisation13
- Healthcare10
- Life scientists with programming skills5
- Bioinformaticians4
- Researchers4
- Biologists3
- Academics2
- Galaxy Administrators2
- Graduate Students2
- Industry Professionals2
- Life Science Researchers2
- Master students2
- Post Docs2
- Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities1
- Bench biologists1
- Computational biologists1
- Curators1
- Database users1
- Developers wanting to distribute their MPI dependent software1
- EIP members1
- Graduates1
- HPC system maintainers wanting to enable MPI containers1
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.1
- Novice users of HPC and anyone who expects to need to use HPC systems at some stage in their research1
- Support Staff1
- Users wanting to construct MPI containers1
- bioinformaticians1
- data librarians1
- life science researchers1
- project manager1
- research software engineers and researchers developing research software1
- software developers, bioinformaticians1
- Show N_FILTERS more
- Author
- Helena Rasche22
- Donat Agosti14
- Julia Giora14
- Plazi Verein14
- The Gulbenkian Training Programme in Bioinformatics13
- Anthony Bretaudeau11
- The Carpentries10
- Bérénice Batut9
- Simon Bray7
- Fotis E. Psomopoulos6
- Pratik Jagtap6
- Subina Mehta6
- Timothy J. Griffin6
- Melanie Föll5
- Praveen Kumar5
- Raphael Mourad5
- Anton Nekrutenko4
- Avans Hogeschool4
- Bazante Sanders4
- Delphine Lariviere4
- Jeremy Goecks4
- Junhao Qiu4
- Leonid Kostrykin4
- Matthias Fahrner4
- Paulo Cilas Morais Lyra Junior4
- Romane LIBOUBAN4
- Saskia Hiltemann4
- Wolfgang Maier4
- Alyssa Pybus3
- Anne Fouilloux3
- Christopher Barnett3
- Cristóbal Gallardo3
- Diana Chiang Jurado3
- Donny Vrins3
- Emma Leith3
- James Johnson3
- Marie Crane3
- Nadia Goué3
- Ray Sajulga3
- Riccardo Massei3
- Stéphanie Robin3
- Aleksandra Ivanova2
- Alex Mahmoud2
- Alex Ostrovsky2
- Alexander Botzki2
- Alexandre Cormier2
- Beatriz Serrano-Solano2
- Björn Grüning2
- Brandon Pickett2
- Daniel Blankenberg2
- Enis Afgan2
- Erwan Corre2
- Federica Moraca2
- Florian Christoph Sigloch2
- Guzel Minibaeva2
- Helge Hecht2
- Henrik Nortamo2
- Jayadev Joshi2
- Jean-Karim Hériché2
- Jesse Harrison2
- Johannes Kirchmair2
- John Davis2
- Karel Berka2
- Khai Van Dang2
- Lars Juhl Jensen2
- Laura Leroi2
- Linelle Abueg2
- Maria Christina Maniou2
- Marius van den Beek2
- Martin Lepšík2
- Nuwan Goonasekera2
- Pablo Moreno2
- Pavel Polishchuk2
- Ralf Gabriels2
- Semen Yesylevskyy2
- Simon Gladman2
- Tharindu Senapathi2
- Thierry Langer2
- Timon Schlegel2
- Wandrille Duchemin2
- Wim Dehaen2
- Yi Sun2
- Adrián Díaz1
- Aleksandra Nenadic1
- Alessandra Villa1
- Alexander Botzki | https://orcid.org/0000-0001-6691-42331
- Alexander Domling1
- Alexandre Varnek1
- Allison Creason1
- Allissa Dillman1
- Alžběta Tuerková1
- Anastassia Vorebieva1
- Andrei Sokolovskii1
- Anna Syme1
- Anna Špačková1
- Annika Jacobsen1
- Annunziata De Luisi1
- Arif ul Maula Khan1
- Aurélien F. A. Moumbock1
- Ave Tooming-Klunderud1
- Show N_FILTERS more
- Contributor
- Saskia Hiltemann96
- Björn Grüning75
- Helena Rasche74
- Bérénice Batut40
- Anthony Bretaudeau25
- Beatriz Serrano-Solano18
- Melanie Föll16
- Marius van den Beek13
- Anup Kumar12
- Cristóbal Gallardo12
- Leonid Kostrykin12
- Simon Bray12
- Peter van Heusden11
- Subina Mehta11
- Donny Vrins9
- Martin Čech8
- Nicola Soranzo7
- Wolfgang Maier7
- Diana Chiang Jurado6
- Teresa Müller6
- Wendi Bacon6
- Anton Nekrutenko5
- Armin Dadras5
- Bazante Sanders5
- Christopher Barnett5
- Gildas Le Corguillé5
- Stéphanie Robin5
- Wandrille Duchemin5
- olisand5
- Delphine Lariviere4
- Linelle Abueg4
- Daniel Faria3
- Daniel Neves3
- Daniel Sobral3
- Deepti Varshney3
- Mallory Freeberg3
- Mélanie Petera3
- Niall Beard3
- Paulo Cilas Morais Lyra Junior3
- Pavankumar Videm3
- Romane LIBOUBAN3
- VIB3
- William Durand3
- Alexandre Cormier2
- Anna Syme2
- Anne Fouilloux2
- Clemens Blank2
- Enis Afgan2
- Erik Garrison2
- Fabio Cumbo2
- Florian Christoph Sigloch2
- Jasper Ouwerkerk2
- Jayadev Joshi2
- Lieven Clement2
- Lounès Chikhi2
- Lucille Delisle2
- Maria Christina Maniou2
- Mark Beaumont2
- Mikko Rautiainen2
- Natalie Whitaker-Allen2
- Nate Coraor2
- Paul Zierep2
- Riccardo Massei2
- Solenne Correard2
- Timon Schlegel2
- Tristan Reynolds2
- Tuur Muyldermans2
- Vitor Sousa2
- Adam Taranto1
- Alexander Botzki1
- Allegra Via1
- Amirhossein Naghsh Nilchi1
- Anna Špačková1
- Armando Arredondo1
- Armando Arredondo Soto1
- Aurélien F. A. Moumbock1
- Aysam Guerler1
- Bert Droesbeke1
- Cameron Watson1
- Carina Silva1
- Catherine Bromhead1
- Christoph Stritt1
- Clea Siguret1
- Daniel Blankenberg1
- Daniel Franco Barranco1
- Daniela Schneider1
- Dave Clements1
- David Bouyssié1
- David Castillo1
- David López1
- David Philip Judge1
- Dominik Martinat1
- Erwan Corre1
- Even Moa Myklebust1
- Felicitas Kindel1
- Florian Heyl1
- François Serra1
- Galo A. Goig1
- Giuseppe Defazio1
- Hampus Pehrsson Ternström1
- Show N_FILTERS more
- Resource type
- e-learning110
- Presentation14
- Documentation13
- Exercise13
- Handout13
- Scripts13
- hands-on tutorial7
- Tutorial5
- lessons4
- slides4
- Training materials3
- Series of videos2
- tutorials2
- youtube video2
- E-Learning1
- Learning pathway1
- PDF1
- Video1
- Webinar1
- Workshop1
- slide deck / presentation1
- slideck/ presentation1
- Show N_FILTERS more
- Related resource
- Associated Training Datasets66
- Associated Workflows66
- Jupyter Notebook (with Solutions)22
- Jupyter Notebook (without Solutions)22
- ARROWSMITH1
- DMPonline1
- DisProt1
- Event1
- Quarto/RMarkdown Notebook1
- RNA-seq data package1
- Show N_FILTERS more
- Node
- Portugal13
- Belgium6
- Czech Republic2
- Denmark2
- Finland2
- EMBL-EBI1
- Italy1
- Netherlands1
- Spain1
- Sweden1
- Switzerland1
- Show N_FILTERS more
- Collection
- ELIXIR Biodiversity Community8
- ELIXIR SIS-Containers - collection of training materials1
- ELIXIR Toxicology Community1
- PINK project1
- Show N_FILTERS more
- Status
- Active25
- Show N_FILTERS more
Show materials from all spaces
Show disabled materials
Show materials with broken links
Show archived materials

Training materials

Competency level: Intermediate

and Licence: Creative Commons Attribution 4.0 International

165 materials found

Results per page:

Filter

Sort

Filter Clear filters

Training materials

PSLS20 - Practical Statistics for the Life Sciences (2020)

Essential Steps of the FAIRification Process

Adding nanomaterial data

Text-mining exercises

Cytoscape stringApp exercises