Training materials
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e-learning
Segmentation of Anatomical Structures in Medical 3-D Images
• BeginnerImaging 3D image Computed tomography Conversion Image segmentation Imaging Medical imaging Object feature extraction Overlay Volume rendering -
e-learning
Where to start with bioimage analysis in Galaxy
• BeginnerImaging Bioimaging Histology Imaging Microscopy -
e-learning
Parameter tuning and optimization - Evaluating nuclei segmentation with Galaxy
• BeginnerImaging Image segmentation Imaging Parameter optimisation Validation -
e-learning
Quantification of single-molecule RNA fluorescence in situ hybridization (smFISH) in yeast cell lines
• BeginnerImaging IDR dataset Imaging Overlay Rasterisation Spot detection -
e-learning
Introduction to Image Analysis using Galaxy
• BeginnerImaging Conversion Fluorescence microscopy Image segmentation Image thresholding Imaging Object counting Overlay -
slides
Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler
• BeginnerImaging Imaging