Training materials
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e-learning
Inferring single cell trajectories with Scanpy (Python)
• BeginnerTranscriptomics MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Comparative gene analysis in unannotated genomes
• BeginnerGenomics Gene and protein families Sequence analysis Phylogeny Comparative genomics Genome Annotation annotation biodiversity cookbook eukaryote … -
slides
Genome assembly quality control.
• BeginnerSequence assembly Assembly -
Webinar, Training materials
An introduction to DisProt
• BeginnerCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis -
e-learning
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• BeginnerGenetic variation Variant Analysis covid19 one-health virology -
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• BeginnerGenetic variation Variant Analysis -
e-learning
Mapping and molecular identification of phenotype-causing mutations
• BeginnerGenetic variation Variant Analysis -
e-learning
Identification of somatic and germline variants from tumor and normal sample pairs
• BeginnerGenetic variation Variant Analysis -
e-learning
Microbial Variant Calling
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
e-learning
Calling variants in non-diploid systems
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote