Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Assembly19
    • Sequence assembly19
    • Exomes8
    • Genome annotation8
    • Genomes8
    • Genomics8
    • Personal genomics8
    • Synthetic genomics8
    • Viral genomics8
    • Whole genomes8
    • Antimicrobial stewardship4
    • Biodiversity4
    • Medical microbiology4
    • Microbial genetics4
    • Microbial physiology4
    • Microbial surveillance4
    • Microbiological surveillance4
    • Microbiology4
    • Molecular infection biology4
    • Molecular microbiology4
    • De novo genome sequencing2
    • Epidemiology2
    • Genome sequencing2
    • Public health2
    • Public health and epidemiology2
    • WGS2
    • Whole genome resequencing2
    • Whole genome sequencing2
    • AMR1
    • Antibiotic resistance (ABR)1
    • Antifungal resistance1
    • Antimicrobial resistance1
    • Antiprotozoal resistance1
    • Antiviral resistance1
    • Extensive drug resistance (XDR)1
    • Mitochondria1
    • Multidrug resistance1
    • Multiple drug resistance (MDR)1
    • Multiresistance1
    • Pandrug resistance (PDR)1
    • Total drug resistance (TDR)1
    • Show N_FILTERS more
    • Tool
    • Galaxy17
    • QUAST7
    • Bandage6
    • BUSCO4
    • FastQC4
    • Flye4
    • NanoPlot4
    • Unicycler4
    • MultiQC3
    • fastp3
    • BWA2
    • Bwa-mem22
    • GenomeScope 2.02
    • Merqury2
    • Minimap22
    • SAMtools2
    • SPAdes2
    • VelvetOptimiser2
    • gfastats2
    • pilon2
    • BEDTools1
    • BLAST1
    • Circos1
    • Diamond1
    • Falco1
    • Filtlong1
    • Galactic Circos1
    • Medaka1
    • Polypolish1
    • Racon1
    • Smudgeplots1
    • compute_sequence_length1
    • kraken21
    • seqtk1
    • shovill1
    • Show N_FILTERS more
    • Content provider
    • GTN19
    • Show N_FILTERS more
    • Keyword
    • Assembly
    • Galaxy Server administration66
    • Development in Galaxy45
    • Single Cell38
    • biodiversity36
    • microgalaxy33
    • Foundations of Data Science31
    • Ecology30
    • FAIR30
    • Statistics and machine learning29
    • Transcriptomics29
    • jupyter-notebook29
    • training29
    • Microbiome28
    • Contributing to the Galaxy Training Material25
    • FAIR Data, Workflows, and Research25
    • FAIR principles22
    • data management22
    • Metadata21
    • Proteomics21
    • Genome Annotation20
    • ansible20
    • FAIR data19
    • Using Galaxy and Managing your Data18
    • git-gat18
    • Climate17
    • Data analysis16
    • Data management16
    • HemaFAIR16
    • Introduction to Galaxy Analyses16
    • Open Science16
    • Teaching and Hosting Galaxy training16
    • fair16
    • interactive-tools16
    • Research Data Management15
    • earth-system15
    • data stewardship14
    • Data management planning13
    • Epigenetics13
    • metagenomics13
    • work-in-progress13
    • Data reuse12
    • Data sharing12
    • Roslin Institute12
    • paper-replication12
    • prokaryote12
    • CONVERGE11
    • European research projects11
    • MIGHTS11
    • Ontologies11
    • Sequence analysis11
    • Variant Analysis11
    • Python10
    • Standards10
    • genes and genomes10
    • ocean10
    • plants10
    • research data management10
    • Bioinformatics9
    • DMP9
    • ELIXIR-CONVERGE9
    • cyoa9
    • transcriptomics9
    • Data management plan8
    • Evolution8
    • FAIR Data8
    • Galaxy Community Building8
    • Metabolomics8
    • assembly8
    • data visualisation8
    • español8
    • gmod8
    • label-free8
    • medicine and health8
    • nanopore8
    • Clinical data7
    • DDA7
    • EBV dataset7
    • EBV workflow7
    • Interoperability7
    • R7
    • Reproducibility7
    • SARS-CoV-27
    • Workflows7
    • dmp7
    • ecology7
    • jbrowse17
    • metabarcoding7
    • next generation sequencing7
    • programming7
    • reproducibility7
    • 16S6
    • Computational modelling6
    • Data Management6
    • Data Management Plan6
    • Data management planning6
    • EeLP6
    • Imaging6
    • Programming6
    • RStudio6
    • Show N_FILTERS more
    • Competency level
    • Beginner
    • Intermediate6
    • Not specified2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International19
    • Show N_FILTERS more
    • Target audience
    • Students19
    • Show N_FILTERS more
    • Author
    • Delphine Lariviere6
    • Simon Gladman6
    • Anton Nekrutenko3
    • Alexandre Cormier2
    • Anna Syme2
    • Bazante Sanders2
    • Bérénice Batut2
    • Cristóbal Gallardo2
    • Helena Rasche2
    • Laura Leroi2
    • Stéphanie Robin2
    • Anthony Bretaudeau1
    • Christophe Klopp1
    • Erwan Corre1
    • Fabian Recktenwald1
    • Grace Hall1
    • Saskia Hiltemann1
    • Solenne Correard1
    • Tom Brown1
    • Tristan Reynolds1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann18
    • Helena Rasche15
    • Bérénice Batut14
    • Björn Grüning13
    • Cristóbal Gallardo12
    • Anthony Bretaudeau8
    • Niall Beard7
    • Nicola Soranzo7
    • Deepti Varshney5
    • Delphine Lariviere5
    • William Durand5
    • Teresa Müller4
    • Tristan Reynolds4
    • Alexandre Cormier3
    • Anna Syme3
    • Anton Nekrutenko3
    • Maria Doyle3
    • Bazante Sanders2
    • Erwan Corre2
    • Gildas Le Corguillé2
    • Laura Leroi2
    • Miaomiao Zhou2
    • Simon Gladman2
    • Solenne Correard2
    • Anne Fouilloux1
    • Enis Afgan1
    • Matúš Kalaš1
    • Nate Coraor1
    • Paul Zierep1
    • Romane LIBOUBAN1
    • Saim Momin1
    • Stéphanie Robin1
    • Tom Brown1
    • Verena Moosmann1
    • Wolfgang Maier1
    • Yvan Le Bras1
    • pimarin1
    • Show N_FILTERS more
    • Resource type
    • e-learning12
    • slides7
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows17
    • Associated Training Datasets16
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Keywords: Assembly

and Competency level: Beginner

19 materials found
  • e-learning

    Unicycler Assembly

    • Beginner
    Sequence assembly Genomics Microbiology Assembly biodiversity microgalaxy prokaryote
  • e-learning

    Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data

    • Beginner
    Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
  • e-learning

    An Introduction to Genome Assembly

    • Beginner
    Sequence assembly Assembly
  • e-learning

    De Bruijn Graph Assembly

    • Beginner
    Sequence assembly Assembly
  • slides

    An introduction to get started in genome assembly and annotation

    • Beginner
    Sequence assembly Assembly
  • slides

    Unicycler Assembly

    • Beginner
    Sequence assembly Assembly prokaryote
  • slides

    Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

    • Beginner
    Sequence assembly Assembly covid19
  • slides

    An Introduction to Genome Assembly

    • Beginner
    Sequence assembly Assembly
  • slides

    De Bruijn Graph Assembly

    • Beginner
    Sequence assembly Assembly
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.