Training materials
-
e-learning
Neoantigen 2: Database merge and FragPipe discovery
• BeginnerProteomics Proteomics label-free -
e-learning
Neoantigen 5b: IEDB binding Validated Neopeptides
• BeginnerProteomics Proteomics label-free -
e-learning
Neoantigen 5a: Predicting HLA Binding
• BeginnerProteomics Proteomics label-free -
e-learning
Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data
• BeginnerMetagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome -
e-learning
Data submission using ENA upload Tool
• BeginnerEcology Biodiversity Ecology biodiversity -
lessons
Prompting 101 - A Beginner's Guide to Communicating with LLMs
• BeginnerNatural language processing prompting ChatGPT Gemini Claude Perplexity NotebookLM prompt engineering LLM -
slides
An earth-system RO-Crate
• BeginnerFAIR Data, Workflows, and Research earth-system marine omics ocean ro-crate -
slides
Intro to DataPLANT ARCs
• BeginnerFAIR Data Workflows and Research -
e-learning
DataPLANT ARCs
• BeginnerFAIR Data, Workflows, and Research data stewardship fair plants -
e-learning
Getting your hands-on earth data
• BeginnerClimate atmosphere biodiversity earth-system land ocean