Training materials
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• BeginnerReproducibility Container Singularity -
Slides
FAIR data - Module 4 (share and publish data)
• BeginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse -
Slides
FAIR data - Module 3 (Metadata)
• BeginnerBioinformatics Biology Data management Data handling metadata data annotation life science standards data sharing -
Slides
FAIR data - Module 2 (data life cycle)
• BeginnerData management Biology Bioinformatics Data handling Data preserving Data storage -
Slides
FAIR data - Module 1 (research data)
• Beginnermetadata Data Life Cycle Reproducibility Data management plan -
Presentation, course materials
Introduction to Nextflow workshop
• BeginnerWorkflows Nextflow DSL2 -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• BeginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Installation instructions, Manual
How to use Common Workflow Language
• BeginnerWorkflows commonwl common workflow language CWL Workflows eLearning EeLP -
Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
• BeginnerToxicology Ontology and terminology -
Slides, Video, Training materials
Mascot training course
• BeginnerProteomics Protein identification Protein Mass Spectrometry
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