Training materials
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Intermediate Research Software Development Skills In Python
•• Intermediateintermediate Coding software engineering Carpentries Incubator -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• IntermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics Metabolomics MGnify Workshop -
Webinar, Training materials
Exploring structural and functional annotations of IDPs with DisProt
•• IntermediateCuration Databases Ontologies Intrinsically disordered proteins Protein sequence analysis Protein function analysis -
e-learning
Genome Assembly Quality Control
•• IntermediateSequence assembly Biodiversity Data quality management Assembly assembly biodiversity quality control -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• IntermediateGenomics Genome Annotation apollo2 biodiversity cyoa eukaryote gmod jbrowse1 -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• IntermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
e-learning
Genomic Data Visualisation with JBrowse
•• IntermediateVisualisation gmod jbrowse1 -
e-learning
Visualisation with Circos
•• IntermediateVisualisation -
e-learning
Genome annotation with Maker (short)
•• IntermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker