Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Molecular diagnostics3
    • Personalised medicine3
    • Precision medicine3
    • Bioinformatics2
    • Biological models2
    • Biological networks2
    • Biological pathways2
    • Cellular process pathways2
    • Disease pathways2
    • Environmental information processing pathways2
    • Gene regulatory networks2
    • Genetic information processing pathways2
    • Interactions2
    • Interactome2
    • Metabolic pathways2
    • Molecular interactions2
    • Molecular interactions, pathways and networks2
    • Networks2
    • Pathways2
    • Signal transduction pathways2
    • Signaling pathways2
    • Simulation experiment2
    • -10 signals1
    • -35 signals1
    • Attenuators1
    • Biomathematics1
    • CAAT signals1
    • CAT box1
    • CCAAT box1
    • Cloud computing1
    • Codon usage1
    • Computational biology1
    • Computer science1
    • CpG islands1
    • DNA chips1
    • DNA microarrays1
    • Enhancers1
    • Expression1
    • GC signals1
    • Gene expression1
    • Gene expression profiling1
    • Gene transcription1
    • Gene translation1
    • HPC1
    • High performance computing1
    • High-performance computing1
    • Isochores1
    • Mathematical biology1
    • MicroRNA sequencing1
    • Omics1
    • Pipelines1
    • Promoters1
    • RNA sequencing1
    • RNA-Seq1
    • RNA-Seq analysis1
    • Small RNA sequencing1
    • Small RNA-Seq1
    • Small-Seq1
    • Software integration1
    • TATA signals1
    • TFBS1
    • Terminators1
    • Theoretical biology1
    • Tool integration1
    • Tool interoperability1
    • Transcription1
    • Transcription factor binding sites1
    • Transcription factors1
    • Transcription factors and regulatory sites1
    • Transcriptional regulatory sites1
    • Transcriptome profiling1
    • WTSS1
    • Whole transcriptome shotgun sequencing1
    • Workflows1
    • miRNA-seq1
    • Show N_FILTERS more
    • Operation
    • Mathematical modelling2
    • Modelling and simulation2
    • Biological network analysis1
    • Biological network modelling1
    • Biological network prediction1
    • Network analysis1
    • Network comparison1
    • Network modelling1
    • Network prediction1
    • Network simulation1
    • Network topology simulation1
    • RNA-Seq analysis1
    • Show N_FILTERS more
    • Tool
    • CARNIVAL1
    • COBREXA.jl1
    • CellNOptR1
    • PhysiCell1
    • progeny1
    • Show N_FILTERS more
    • Content provider
    • PerMedCoE6
    • Centre for Genomic Regulation (CRG)1
    • Show N_FILTERS more
    • Keyword
    • HPC
    • jupyter-notebook22
    • Foundations of Data Science17
    • Proteomics17
    • Statistics and machine learning14
    • Imaging12
    • biodiversity11
    • Data mining10
    • Data reuse10
    • FAIR Data9
    • Genome Annotation9
    • Online Repository9
    • ai-ml9
    • elixir9
    • FAIR8
    • Rare Diseases & Research8
    • jbrowse18
    • microgalaxy8
    • Computational chemistry7
    • Image segmentation7
    • Using Galaxy and Managing your Data7
    • Assembly6
    • eukaryote6
    • gmod6
    • Data analysis5
    • Genomics5
    • Large Language Model5
    • Metabolomics5
    • Python5
    • Visualisation5
    • covid195
    • metagenomics5
    • one-health5
    • training5
    • Multi-channel image4
    • RDF4
    • Reproducible Science4
    • TreatmentBank4
    • Variant Analysis4
    • work-in-progress4
    • workflows4
    • RNA-Seq3
    • Biological databases3
    • Clinical data3
    • Containers3
    • DIA3
    • Data management3
    • Deep learning3
    • GA4GH3
    • Genome Assembly3
    • Global Biodiversity Information Facility3
    • Image annotation3
    • Knowledge graph3
    • Machine Learning3
    • Materials Citation3
    • Object feature extraction3
    • Overlay3
    • R3
    • RNA3
    • SQL3
    • Scientific Collections3
    • Single Cell3
    • Structure prediction3
    • Taxonomic concepts3
    • Transcriptomics3
    • assembly3
    • biostatistics3
    • data stewardship3
    • eukaryota3
    • pacbio3
    • prokaryote3
    • proteogenomics3
    • transcriptomics3
    • R-programming2
    • 10x2
    • AAI2
    • AlphaFold2
    • AlphaFold Database (13181)2
    • Bioinformatics2
    • Biomodelling2
    • Braker32
    • Coding2
    • Computing environment2
    • Conversion2
    • DMP2
    • DMP templates2
    • DMP tools2
    • Data handling2
    • Data publishing2
    • Data sharing2
    • Deep Learning2
    • Evolution2
    • FAIR Data, Workflows, and Research2
    • FAIR principles2
    • GDPR2
    • Galaxy Server administration2
    • Genome analysis2
    • Genome assembly2
    • Genomic data2
    • Genomic sequences2
    • Show N_FILTERS more
    • Competency level
    • Intermediate
    • Beginner3
    • Not specified3
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International2
    • Apache License 2.01
    • GNU General Public License v2.0 only1
    • GNU General Public License v3.0 only1
    • License Not Specified1
    • MIT License1
    • Show N_FILTERS more
    • Target audience
    • Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities1
    • Novice users of HPC and anyone who expects to need to use HPC systems at some stage in their research1
    • life science researchers1
    • Show N_FILTERS more
    • Author
    • Bartosz Bartmanski2
    • David Vicente1
    • Emilio Palumbo1
    • Henrik Nortamo1
    • Javi Conejero1
    • Jesse Harrison1
    • Jose Espinosa-Carrasco1
    • Laurent Heirendt1
    • Miroslav Kratochvil1
    • St Elmo Wilken1
    • Toni Hermoso Pulido1
    • Show N_FILTERS more
    • Resource type
    • Tutorial6
    • Course materials1
    • Presentation1
    • Training materials1
    • Show N_FILTERS more
    • Node
    • Finland1
    • Spain1
    • Show N_FILTERS more
    • Status
    • Active2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Competency level: Intermediate

and Keywords: HPC

7 materials found
  • Training materials, Course materials

    Linux Containers

    ELIXIR node event
    •• Intermediate
    Bioinformatics Computer science Containers Containerization Reproducibility Linux HPC
  • Tutorial, Presentation

    Materials from 'Introduction to High Performance Computing for Life Scientists' course

    •• Intermediate
    Computational biology HPC GPU parallel computing
  • Tutorial

    Tutorial on developing Building Blocks

    •• Intermediate
    Bioinformatics Workflows Personalised medicine HPC building blocks
  • Tutorial

    Tutorial on working with computing clusters

    ELIXIR node event
    •• Intermediate
    HPC
  • Tutorial

    Tutorial on CARNIVAL

    •• Intermediate
    Molecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics
  • Tutorial

    Tutorials on COBREXA

    •• Intermediate
    Personalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC
  • Tutorial

    Tutorial on CellNOpt

    •• Intermediate
    Personalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.