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Scientific topic
- Data management58
- Metadata management58
- Research data management (RDM)58
- FAIR data35
- Findable, accessible, interoperable, reusable data35
- Genome annotation6
- Exomes5
- Genomes5
- Genomics5
- Personal genomics5
- Synthetic genomics5
- Viral genomics5
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- Comparative transcriptomics4
- Data brokering4
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- Data submission4
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- Transcriptome4
- Transcriptomics4
- Chromosome walking3
- Clone verification3
- DNA-Seq3
- DNase-Seq3
- Genetic variation analysis3
- Genetic variation annotation3
- High throughput sequencing3
- High-throughput sequencing3
- MicroRNA sequencing3
- NGS3
- NGS data analysis3
- Next gen sequencing3
- Next generation sequencing3
- Panels3
- Primer walking3
- RNA sequencing3
- RNA-Seq3
- RNA-Seq analysis3
- SPARQL3
- SPARQL Protocol and RDF Query Language3
- Sanger sequencing3
- Sequence variation analysis3
- Sequencing3
- Small RNA sequencing3
- Small RNA-Seq3
- Small-Seq3
- Targeted next-generation sequencing panels3
- Transcript variant analysis3
- Transcriptome profiling3
- Variant analysis3
- WTSS3
- Whole transcriptome shotgun sequencing3
- miRNA-seq3
- Breakend assembly2
- Comparative genomics2
- Content management2
- Data rendering2
- Data visualisation2
- Database management2
- Document management2
- File management2
- Functional genome annotation2
- Genome assembly2
- Genomic assembly2
- Metagenome annotation2
- Metagenomics2
- Record management2
- SQL2
- Sequence assembly (genome assembly)2
- Sequence read processing2
- Shotgun metagenomics2
- Structural genome annotation2
- Structured Query Language2
- Applied ontology1
- Bayesian methods1
- Biostatistics1
- DNA methylation1
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- Integrative omics1
- LC-MS-based metabolomics1
- MS-based metabolomics1
- MS-based targeted metabolomics1
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- Markov processes1
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- Metabolites1
- Metabolome1
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Keyword
- Data management
- R307
- Genomics139
- Python125
- Transcriptomics118
- Next generation sequencing115
- RNA-seq112
- Bioinformatics82
- Statistics75
- Machine learning65
- Data science64
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- Unix/Linux59
- Reproducibility56
- FAIR data55
- Variant analysis48
- Data visualization46
- Version control46
- Workflows44
- Genome assembly41
- General36
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- Metagenomics32
- Genome28
- Molecular28
- FAIR27
- Long read sequencing26
- Nextflow26
- data management24
- Containerization22
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- Shiny21
- Spatial transcriptomics21
- Docker20
- RDM20
- sensitive data19
- CfRR19
- High performance computing19
- Phylogenetics19
- REDCap19
- programming19
- reproducible research19
- scientific computing19
- Comparative genomics18
- life-sciences18
- Artificial intelligence17
- Galaxy17
- ChIP-seq16
- Cloud computing15
- Anatomy Physiology and Atlases14
- Quarto14
- Epigenetics13
- Image analysis13
- Pathways and Networks13
- Proteomics13
- Shell13
- ATAC-seq12
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- Europe PMC12
- Introduction12
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- metadata12
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- databases10
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- Python biologists9
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- computer-science9
- metagenomics9
- policies9
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- PDBe8
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- Intro7
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Competency level
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- Beginner16
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Target audience
- Clinicians3
- PhD students3
- DMP writers1
- Life Science Researchers1
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia.1
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Author
- NBIS - National Bioinformatics Infrastructure Sweden9
- The Carpentries Incubator6
- Data Carpentry3
- SIB Swiss Institute of Bioinformatics3
- Fred Hutch Data Science Lab2
- Institut Français de Bioinformatique (IFB)2
- Sara Morsy2
- jhudsl2
- Ana M.P. Melo1
- BiGCaT, Department of Translational Genomics1
- BioData.pt1
- BioRDM1
- British Ecological Society Better Science Guides1
- CRUK CI Bioinformatics Core1
- Coding For Reproducible Research (CfRR)1
- Daniel Faria1
- Diana Pilvar1
- ELIXIR Belgium1
- ELIXIR Europe1
- ELIXIR Europe Training1
- ELIXIR-Norway Training1
- FAIR-by-Design-Methodology1
- Galaxy Project1
- Genome Informatics Facility1
- Genomics Aotearoa1
- Health Data Science Sandbox1
- Hofmann, Oliver1
- Melbourne Bioinformatics1
- NFDI4BIOIMAGE1
- NUTRIOME1
- OBOAcademy1
- OpenSciency1
- Pope, Bernie1
- RStudio Education1
- SciLifeLab-Training1
- Taouk, Kamile1
- The Carpentries Lab1
- Utrecht University1
- VIB Technologies: Training material and software projects1
- VIB Training & Conferences1
- Wong-Erasmus, Marie1
- bioinformatics.ca1
- feichtingerm1
- posit-conf-20231
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Contributor
- Toby Hodges15
- François Michonneau13
- Zhian N. Kamvar13
- Erin Becker12
- Tracy Teal12
- maneesha11
- Michael R. Crusoe10
- Paula Andrea Martinez10
- Remi Rampin10
- Abby Cabunoc Mayes9
- Allen Lee9
- Andy Boughton9
- Christina K.9
- David Pérez-Suárez9
- James Allen9
- Jon Pipitone9
- Katie Anne Mills9
- Katrin Leinweber9
- Michael Hansen9
- Piotr Banaszkiewicz9
- Rayna M Harris9
- Rémi Emonet9
- Sarah Brown9
- W. Trevor King9
- Alex Whan8
- Ana Conrado8
- Andrew Sanchez8
- Anthony Gitter8
- Brandon Curtis8
- David Mawdsley8
- Elin Kronander8
- EvanWill8
- Gabriel A. Devenyi8
- Gerard Capes8
- Greg Wilson8
- Henry Schreiner8
- Ian Lee8
- Jeff Oliver8
- Jemma Stachelek8
- Joel Nothman8
- Jonah Duckles8
- João Rodrigues8
- K.E. Koziar8
- Maxim Belkin8
- Michael Joseph8
- Nick Young8
- Paola Prieto8
- Raniere Silva8
- Renato Alves8
- Stephan Druskat8
- William L. Close8
- Wolmar Nyberg Åkerström8
- YvonneKallberg8
- naught1018
- trk8
- rdbjorvang6
- Niclas Jareborg5
- Candace Savonen4
- Carrie Wright4
- Kate Isaac4
- Tomasz Zielinski4
- actions-user4
- jhudsl-robot4
- Edward Wallace3
- Federico Bianchini3
- Pete3
- Robert Davey3
- Stephan3
- hackmd-deploy3
- livia-scorza3
- Aleksandra Pawlik2
- Benson Muite2
- Bert Droesbeke2
- BioData.pt Admin2
- Christian2
- Christie Bahlai2
- Daniel Faria2
- Danielle Welter2
- De2
- Diana Pilvar2
- Ethan White2
- Frederik Coppens2
- Geert van Geest2
- Gil Poiares-Oliveira2
- Helene Chiapello2
- Heleri Inno2
- Hilmar Lapp2
- JCSzamosi2
- Julien Seiler2
- Karen Cranston2
- Kari L. Jordan, PhD2
- Karthik Ram2
- Korbinian Bösl2
- Laurent Gatto2
- Livia Scorza2
- Malvika Sharan2
- MijkeJetten2
- Munazah Andrabi2
- Nazeeefa2
- Nicola Soranzo2
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Status
- Active3
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