TeSS (Training eSupport System)

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- Scientific topic
- Data management246
- Metadata management246
- Research data management (RDM)246
- Genome annotation231
- Exomes209
- Genomes209
- Genomics209
- Personal genomics209
- Synthetic genomics209
- Viral genomics209
- Whole genomes209
- Comparative transcriptomics192
- Transcriptome192
- Transcriptomics192
- MicroRNA sequencing174
- RNA sequencing174
- RNA-Seq174
- RNA-Seq analysis174
- Small RNA sequencing174
- Small RNA-Seq174
- Small-Seq174
- Transcriptome profiling174
- WTSS174
- Whole transcriptome shotgun sequencing174
- miRNA-seq174
- FAIR data167
- Findable, accessible, interoperable, reusable data167
- R153
- R program153
- R script153
- Bayesian methods148
- Biostatistics148
- Descriptive statistics148
- Gaussian processes148
- Inferential statistics148
- Markov processes148
- Multivariate statistics148
- Probabilistic graphical model148
- Probability148
- Statistics148
- Statistics and probability148
- Algorithms129
- Computer programming129
- Data structures129
- Programming languages129
- Software development129
- Software engineering129
- High-throughput sequencing116
- Chromosome walking115
- Clone verification115
- DNA-Seq115
- DNase-Seq115
- High throughput sequencing115
- NGS115
- NGS data analysis115
- Next gen sequencing115
- Next generation sequencing115
- Panels115
- Primer walking115
- Sanger sequencing115
- Sequencing115
- Targeted next-generation sequencing panels115
- Active learning93
- Ensembl learning93
- Kernel methods93
- Knowledge representation93
- Machine learning93
- Neural networks93
- Recommender system93
- Reinforcement learning93
- Supervised learning93
- Unsupervised learning93
- Bioinformatics91
- Metagenomics83
- Shotgun metagenomics83
- Python78
- Python program78
- Python script78
- py78
- Bottom-up proteomics76
- Discovery proteomics76
- MS-based targeted proteomics76
- MS-based untargeted proteomics76
- Metaproteomics76
- Peptide identification76
- Protein and peptide identification76
- Proteomics76
- Quantitative proteomics76
- Targeted proteomics76
- Top-down proteomics76
- Biodiversity70
- Data rendering62
- Data visualisation62
- Single-cell genomics62
- Single-cell sequencing62
- Antimicrobial stewardship56
- Medical microbiology56
- Microbial genetics56
- Microbial physiology56
- Microbial surveillance56
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- Operation
- Data handling57
- File handling57
- File processing57
- Processing57
- Report handling57
- Utility operation57
- Data extraction18
- Data retrieval18
- Data retrieval (metadata)18
- Metadata retrieval18
- Retrieval18
- Data visualisation16
- Molecular visualisation16
- Plotting16
- Rendering16
- Visualisation16
- Data analysis13
- Annotation11
- Data brokering11
- Data deposition11
- Data deposition brokering11
- Data submission11
- Database deposition11
- Database submission11
- Mathematical modelling11
- Modelling and simulation11
- Data management planning8
- Database retrieval8
- Query8
- Query and retrieval8
- Quality control5
- Validation5
- Allele calling4
- Database search4
- Exome variant detection4
- Functional enrichment analysis4
- GSEA4
- Gene set analysis4
- Gene-set enrichment analysis4
- Gene-set over-represenation analysis4
- Genome variant detection4
- Germ line variant calling4
- Methylation analysis4
- Methylation profile analysis4
- Mutation detection4
- Normalisation4
- Search4
- Somatic variant calling4
- Standardisation4
- Standardisation and normalisation4
- Variant calling4
- Variant mapping4
- de novo mutation detection4
- Data formatting2
- Data reformatting2
- Design2
- File format conversion2
- File formatting2
- File reformatting2
- Format conversion2
- Ontology browsing2
- Ontology visualisation2
- Peptide database search2
- Peptide identification2
- Peptide-spectrum-matching2
- RNA-Seq analysis2
- Alignment1
- Alignment construction1
- Alignment generation1
- Biological network analysis1
- Biological network modelling1
- Biological network prediction1
- Classification1
- Comparison1
- Data editing1
- Data filtering1
- Expression analysis1
- Expression data analysis1
- Functional genome annotation1
- Gene expression analysis1
- Gene expression data analysis1
- Gene expression regulation analysis1
- Genome annotation1
- Image analysis1
- Metagenome annotation1
- Metagenomic inference1
- Microarray data analysis1
- Multiple alignment1
- Multiple sequence alignment1
- Network analysis1
- Network comparison1
- Network modelling1
- Network prediction1
- Network simulation1
- Network topology simulation1
- Protein expression analysis1
- Protein secondary structure visualisation1
- RNA secondary structure visualisation1
- Read pre-processing1
- Sequence classification1
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- Tool
- Galaxy365
- Bioconductor242
- FastQC36
- Data Stewardship Wizard30
- SAMtools27
- MultiQC26
- BWA21
- REDCap20
- BEDTools17
- fastp16
- scikit-learn16
- JBrowse15
- SCANPY15
- Falco14
- Cutadapt13
- DeepTools13
- ggplot213
- BLAST12
- QUAST12
- RDMkit12
- BUSCO11
- Galaxy Image Analysis11
- RStudio11
- STAR11
- GEMINI10
- scikit-image10
- taxonomy_krona_chart10
- FreeBayes9
- NanoPlot9
- Trimmomatic9
- Bandage8
- FASTX-Toolkit8
- BCFtools7
- BamTools7
- Biopython7
- HISAT27
- Ontology Lookup Service7
- Trim Galore7
- msConvert7
- seqtk7
- European Nucleotide Archive (ENA)6
- Flye6
- MAFFT6
- MaxQuant6
- Minimap26
- Open Babel6
- Unicycler6
- Workflow4Metabolomics6
- gffread6
- BridgeDb5
- COPASI5
- DESeq25
- Galactic Circos5
- MetaPhlAn5
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
- RSeQC5
- SRA Software Toolkit5
- Salmon5
- StringTie5
- anndata5
- annotatemyids5
- compute_sequence_length5
- gffcompare5
- kraken25
- xcms5
- Bowtie 24
- Bwa-mem24
- CellProfiler4
- Chipster4
- Diamond4
- GOseq4
- KrakenTools4
- MACS4
- MSstats4
- Merqury4
- Newick Utilities4
- QualiMap4
- The Protein Data Bank (PDB)4
- UniProt4
- bx-python4
- mothur4
- snpEff4
- Apollo3
- Bakta3
- Bracken3
- BridgeDbR3
- Cardinal3
- Clustal 1.8 (Clustal W, Clustal X)3
- DISEASES3
- DropletUtils3
- FastTree3
- GenomeScope 2.03
- GraPhlAn3
- InterMine3
- InterMineR3
- InterProScan (EBI)3
- MGnify (was EBI Metagenomics)3
- OMArk3
- OMERO3
- R3
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- Standard database or policy
- FAIRsharing6
- RDA DMP Common Standard for Machine-Actionable Data Management Plans5
- European Nucleotide Archive4
- NCBI Gene4
- Bioconductor3
- Ensembl3
- Common Workflow Language2
- DisProt2
- Minimum Information about Plant Phenotyping Experiment2
- OBO Foundry2
- Ontology Lookup Service2
- PRoteomics IDEntifications database2
- STRING: functional protein association networks2
- Search Tool for Interactions of Chemicals2
- The European Genome-phenome Archive2
- The Observational Medical Outcomes Partnership Common Data Model2
- eNanoMapper Ontology2
- Wheat Data Interoperability Guidelines 1
- BRENDA1
- BcForms Grammar1
- Bioschemas1
- BpForms Grammar1
- BridgeDb1
- Cellosaurus1
- Chemical Entities of Biological Interest1
- Crop Ontology1
- Datanator1
- FAIR sharing1
- FAIRtracks1
- Gene3D1
- Genomics England | PanelApp1
- HumanMine1
- IUPAC International Chemical Identifier1
- Identifiers.org Registry1
- Integrated resource of protein families, domains and functional sites1
- Investigation Study Assay JSON1
- Investigation Study Assay Tabular1
- MDL molfile Format1
- MGnify1
- ModelArchive1
- Multi-Crop Passport Descriptors1
- ObjTables1
- Observational Medical Outcomes Partnership Standard Vocabulary1
- PRINTS1
- Plant Phenotype Experiment Ontology1
- Research Object Crate1
- Resource Identification Portal 1
- SUPERFAMILY1
- Schema.org1
- Simplified Molecular Input Line Entry Specification Format1
- Stress Knowledge Map1
- Structural Classification Of Proteins1
- The FAIR Principles1
- The Human Metabolome Database1
- UniProt Knowledgebase1
- Wheat Trait Ontology1
- Wikidata1
- WorkflowHub1
- Worldwide Protein Data Bank1
- Zenodo 1
- data.eNanoMapper.net1
- i2b2-patient_visit_dimensions1
- neXtProt1
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- Content provider
- Glittr.org837
- GTN833
- European Bioinformatics Institute (EBI)490
- Bioconductor242
- IFB French Institute of Bioinformatics149
- ERGA Knowledge Hub128
- SIB Swiss Institute of Bioinformatics115
- GOBLET110
- Australian BioCommons88
- Bioinformatics Visualization72
- ELXIR-UK DaSH70
- Software Carpentry70
- Bioinformatics and Biomathematics Training Hub62
- NGS Registry60
- DTLS - Dutch Techcentre For Life Sciences41
- VIB Training & Conferences38
- de.NBI36
- Data Carpentry34
- Khan Academy Statistics32
- BY-COVID31
- VIB Bioinformatics Core30
- Canadian Bioinformatics Workshops26
- ELIXIR24
- Coding for Reproducible Research (CfRR)19
- Coursera19
- VBCF BioComp19
- ELIXIR Portugal18
- CINECA PROJECT17
- CSC - IT Center for Science13
- ELIXIR Norway13
- ELIXIR Estonia12
- PerMedCoE12
- NBIS11
- VHP4Safety10
- eNanoMapper10
- Bioschemas9
- EMBL-ABR9
- NanoCommons9
- Barcelona Supercomputing Center (BSC)8
- Centre for Digital Life Norway8
- Department of Bioinformatics - BiGCaT, Maastricht University8
- Genome 3D8
- InterMine8
- Centre for Genomic Regulation (CRG)7
- BioData.pt6
- Data Steward team Ghent University6
- ELIXIR Luxembourg6
- ELIXIR-SI eLearning Platform (EeLP)6
- ELIXIR: The Czech Republic Node6
- Danish National Health Data Science Sandbox5
- ELIXIR Slovenia5
- LIPID MAPS5
- UNIVERSE-HPC project5
- COG-Train4
- Proteomics Academy4
- University of Cambridge Bioinformatics Training4
- ELIXIR AAI3
- Novo Nordisk Foundation Center for Protein Research3
- Pattern Institute3
- University of Edinburgh3
- DeiC – Danish e-Infrastructure Cooperation2
- SciLifeLab2
- Software Sustainability Institute2
- The Carpentries2
- Biomedical Sciences Research Center "Alexander Fleming"1
- CNAG-CRG1
- Cloud-SPAN1
- EOSC4Cancer1
- ExCALIBUR1
- FAIRsharing1
- Fraunhofer FIT1
- Future Learn1
- Health-RI1
- NYU Langone Health1
- Open Science MOOC1
- Seqera1
- UCLouvain Bioinformatics Platform1
- VIB Conferences1
- WikiPathways1
- proteomicsML1
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- Keyword
- R331
- Genomics169
- Transcriptomics161
- Python149
- RNA-seq128
- Next generation sequencing119
- Data management104
- Bioinformatics98
- Statistics80
- FAIR data78
- FAIR70
- Galaxy Server administration68
- Machine learning68
- Reproducibility68
- Data science67
- Unix/Linux62
- Single-cell sequencing61
- Proteomics56
- Workflows55
- jupyter-notebook55
- data management54
- Data visualization52
- Version control52
- Foundations of Data Science50
- Variant analysis50
- biodiversity47
- metagenomics47
- Development in Galaxy45
- Statistics and machine learning45
- Genome assembly43
- Galaxy41
- Single Cell41
- microgalaxy41
- Metagenomics40
- training39
- General36
- Genome annotation36
- Rare Diseases & Research36
- FAIR Data, Workflows, and Research33
- Microbiome33
- QC33
- Nextflow32
- Genome Annotation31
- Ecology30
- programming30
- Assembly28
- FAIR principles28
- Genome28
- Metadata28
- Molecular28
- Alignment27
- Contributing to the Galaxy Training Material27
- Data analysis27
- Phylogenetics27
- Using Galaxy and Managing your Data27
- biohackaton 201827
- Epigenetics26
- Long read sequencing26
- RDM26
- bioinformatics26
- Docker25
- Data reuse24
- High performance computing24
- Annotation23
- Containerization23
- data stewardship23
- ChIP-seq22
- Metabolomics22
- Microbiology22
- Shiny22
- Spatial transcriptomics22
- metadata22
- NGS21
- Open Science21
- RNA-Seq21
- ansible21
- reproducible research21
- BAM20
- FASTQ20
- Imaging20
- Research Data Management20
- life-sciences20
- sensitive data19
- CfRR19
- Cloud computing19
- Differential-expression19
- FAIR Data19
- Pre-processing19
- REDCap19
- Sequence analysis19
- git-gat19
- scientific computing19
- Artificial intelligence18
- Comparative genomics18
- Data sharing18
- Programming18
- Variant Analysis18
- interactive-tools18
- transcriptomics18
- work-in-progress18
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- Competency level
- Not specified3048
- Beginner972
- Intermediate283
- Advanced51
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- Licence
- License Not Specified2529
- Creative Commons Attribution 4.0 International1252
- Creative Commons Attribution Share Alike 4.0 International145
- MIT License130
- GNU General Public License v3.0 only50
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International45
- Creative Commons Zero v1.0 Universal44
- Creative Commons Attribution Non Commercial Share Alike 4.0 International42
- Other (Not Open)24
- Apache License 2.017
- Other (Non-Commercial)15
- BSD 3-Clause "New" or "Revised" License14
- Creative Commons Attribution Non Commercial 4.0 International12
- Other (Attribution)6
- Creative Commons Attribution 1.0 Generic5
- Other (Open)4
- CeCILL Free Software License Agreement v2.13
- Creative Commons Attribution No Derivatives 4.0 International3
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- GNU General Public License v2.0 only2
- Academic Free License v3.01
- Creative Commons Attribution 2.0 Generic1
- Creative Commons Attribution No Derivatives 2.0 Generic1
- Creative Commons Attribution Non Commercial 2.0 Generic1
- Creative Commons Attribution Non Commercial Share Alike 2.0 Generic1
- Do What The F*ck You Want To Public License1
- Open Data Commons Attribution License v1.01
- The Unlicense1
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- Target audience
- Students574
- Researchers240
- PhD students189
- Biologists, Genomicists, Computer Scientists170
- Post-Doctoral Fellows165
- Clinicians128
- Galaxy Administrators113
- Graduate students88
- Graduate Students82
- Life Science Researchers79
- Biologists55
- Instructors52
- post-docs48
- Novice44
- bioinformaticians42
- Bioinformaticians34
- PhD candidate27
- Intermediate26
- Scientific community26
- beginner bioinformaticians26
- Data Managers23
- Data stewards23
- PhD candidates23
- Scientists22
- Bench biologists19
- PhD Students18
- Academia/ Research Institution17
- Data Scientists17
- Industry17
- Non-Profit Organisation17
- Beginners16
- Data Scientist16
- Data managers16
- Trainers16
- life scientists16
- Healthcare15
- health professionals13
- Master students13
- Research Scientists13
- Researcher in life sciences13
- data stewards13
- Biomedical Researchers12
- Computational biologists12
- Researcher12
- healthcare professionals12
- software developers, bioinformaticians12
- Post Docs11
- biocurators11
- Biomedical researchers9
- Life scientists9
- Training Designers9
- Training instructors9
- biologists9
- Health Care Professionals8
- Life Scientists8
- Patient Advocates 8
- PhD8
- modelers8
- rare disease patients representatives7
- Beginner7
- Bioinformatician7
- Life scientists with programming skills7
- All postgraduates6
- Clinical Scientists6
- PI6
- computational scientists6
- data managers6
- plant researchers6
- project manager6
- Chemists5
- General Interest5
- Professors5
- Undergraduate students5
- genomics researchers5
- postdocs5
- postgrad5
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Biologists with little or no prior computational experience4
- Curators4
- Laboratory technicians4
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members4
- Postgraduate students4
- Professor4
- Veterinarians4
- data steward / data manager4
- postdoctoral researchers4
- researchers4
- systems biologists4
- Bioinformatician, Bioanalysts3
- Data Steward3
- Database users3
- General Physicians3
- Industry Professionals3
- Ontologists3
- Policy makers3
- Postdocs and Staff members3
- Researchers and bioinformaticians in other projects interested in depositiong data at the EGA3
- Technicians3
- geneticists3
- life science researchers3
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- Author
- Helena Rasche127
- Bérénice Batut111
- SIB Swiss Institute of Bioinformatics108
- Martin Morgan97
- Saskia Hiltemann66
- The Carpentries Incubator52
- Björn Grüning50
- Simon Gladman37
- The Gulbenkian Training Programme in Bioinformatics36
- bioinformatics.ca35
- bebatut32
- bgruening32
- Anthony Bretaudeau28
- Anton Nekrutenko28
- Yvan Le Bras28
- Nate Coraor27
- Subina Mehta27
- Donat Agosti25
- John Chilton25
- Julia Giora25
- Nicola Soranzo25
- Plazi Verein25
- Teaching materials at the Harvard Chan Bioinformatics Core25
- Saskia Lawson-Tovey24
- The Carpentries24
- Egon Willighagen22
- Fotis E. Psomopoulos21
- Michelle Brazas21
- NBIS - National Bioinformatics Infrastructure Sweden20
- posit-conf-202320
- Anne Fouilloux19
- Coding for Reproducible Research Initiative19
- Marie Josse19
- Wendi Bacon19
- Bazante Sanders18
- Katarzyna Kamieniecka18
- Krzysztof Poterlowicz18
- Laura Cooper18
- Terri Attwood18
- UC Davis Bioinformatics Core Training Page18
- András Aszódi17
- Data Carpentry17
- Mehmet Tekman17
- Wandrille Duchemin17
- posit::conf(2024)17
- shiltemann17
- Paul Zierep16
- Cristóbal Gallardo15
- Samaha, Georgina15
- Sergio Martínez Cuesta15
- Alexander Botzki14
- Julia Jakiela14
- Maria Doyle14
- Mijke Jetten14
- Monique Zahn14
- Pratik Jagtap14
- nekrut14
- CRUK CI Bioinformatics Core13
- Dave Clements13
- Delphine Lariviere13
- Donny Vrins13
- James Johnson13
- Katherine Do13
- Personalized Health Informatics Group13
- Wolfgang Maier13
- Andrew Mason12
- Celia van Gelder12
- Jenny Drnevich @jenny12
- Korbinian Bösl12
- Marius van den Beek12
- Melanie Föll12
- Patricia Palagi12
- Simon Andrews12
- Simon Bray12
- Anup Kumar11
- Eija Korpelainen11
- Geert van Geest11
- Khaled Jum'ah11
- Mathieu Bourgey11
- Pavankumar Videm11
- Various11
- Allegra Via10
- Canadian Bioinformatics Workshops10
- Daniel Blankenberg10
- Federico Bianchini10
- Fred Hutch Data Science Lab10
- Martin Čech10
- Paul Yorke10
- Anika Erxleben9
- David Wishart9
- ELIXIR Estonia9
- Jared Simpson9
- Lucille Delisle9
- Praveen Kumar9
- allegra.via Via9
- rstudio::conf(2022)9
- Anne Pajon8
- Avans Hogeschool8
- Bastian Schiffthaler @bastian8
- Boris Steipe8
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- Contributor
- Saskia Hiltemann594
- Helena Rasche501
- Björn Grüning420
- Bérénice Batut263
- Nicola Soranzo180
- Martin Čech128
- Anthony Bretaudeau107
- Cristóbal Gallardo104
- Niall Beard90
- Toby Hodges83
- Wendi Bacon77
- Nate Coraor70
- François Michonneau69
- Armin Dadras64
- Erin Becker63
- Gildas Le Corguillé63
- Marius van den Beek60
- William Durand59
- Zhian N. Kamvar59
- Mine Cetinkaya-Rundel56
- Robert Andrews55
- Katrin Leinweber54
- Raniere Silva54
- Simon Gladman54
- Tracy Teal53
- W. Trevor King52
- Andy Boughton51
- maneesha51
- Beatriz Serrano-Solano49
- Katie Anne Mills48
- Maxim Belkin48
- Teresa Müller48
- Lucille Delisle46
- Mehmet Tekman46
- Yvan Le Bras45
- David Pérez-Suárez44
- Gabriel A. Devenyi44
- Canadian Bioinformatics Workshops43
- Munazah Andrabi43
- Abby Cabunoc Mayes42
- EvanWill42
- Ian Lee42
- Jon Pipitone42
- Jonah Duckles42
- Michael Hansen42
- Piotr Banaszkiewicz42
- Brandon Curtis41
- David Mawdsley41
- Greg Wilson41
- Jemma Stachelek41
- Remi Rampin41
- Allen Lee40
- Andrew Sanchez40
- Michael R. Crusoe40
- Pavankumar Videm40
- Jeff Oliver39
- Joel Nothman39
- Nick Young39
- naught10139
- James Allen38
- Rémi Emonet38
- William L. Close38
- Rayna M Harris37
- Marie Josse36
- Wolfgang Maier36
- Melanie Föll35
- Sarah Brown35
- Gerard Capes34
- Maria Doyle33
- Anup Kumar32
- Renato Alves31
- trk31
- Ana Conrado29
- K.E. Koziar29
- Stephan Druskat29
- Christina K.28
- Simon Bray28
- Subina Mehta28
- Alex Whan27
- Paula Andrea Martinez26
- Anne Fouilloux25
- Michael Joseph25
- Anthony Gitter24
- Donny Vrins24
- Geert van Geest24
- João Rodrigues24
- Peter van Heusden23
- Sarah Stevens22
- Julia Jakiela21
- Robert Davey21
- Wolmar Nyberg Åkerström21
- actions-user21
- Henry Schreiner20
- Hilmar Lapp20
- Leonid Kostrykin20
- Bazante Sanders19
- The Gulbenkian Training Programme in Bioinformatics19
- Anton Nekrutenko18
- Elin Kronander18
- Niclas Jareborg18
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- Resource type
- e-learning741
- Recorded webinar302
- Video199
- slides191
- Tutorial134
- Training materials77
- Presentation66
- Course materials62
- Webinar62
- Slides60
- Talk53
- lessons53
- tutorial50
- hands-on tutorial38
- video38
- Slidedeck32
- course materials31
- Documentation30
- exercise26
- Scripts20
- Exercise18
- Handout17
- Lecture16
- Poster16
- PDF14
- Slideshow14
- E-learning10
- E-Learning8
- Jupyter notebook7
- Series of videos6
- FREE online course6
- Online material6
- Bioinformatics5
- Coding5
- online course5
- online modules5
- tutorials5
- youtube video5
- examples4
- podcast4
- Book3
- Computational Biology3
- Computer Science3
- Computer Software3
- Data Science3
- Education3
- How-to guide3
- Learning pathway3
- Life Sciences Literature Database3
- Mock data3
- Programming3
- e-Learning3
- online tutorial3
- scripts3
- slideck/ presentation3
- API reference2
- Installation instructions2
- Manual2
- Open educational resource2
- Series of videos2
- Vignette2
- case studies2
- educational materials2
- handbook2
- knowledgebase2
- presentation2
- workflow2
- Blog post1
- Carpentries style curriculum1
- E-learning + workshop1
- Educational Resource1
- Jupyter notebooks1
- Life Science Literature Database1
- Machine Learning1
- Metadata Registry1
- Notes1
- Quiz1
- R Shiny application1
- Recording1
- Tool1
- Toolkit1
- Training materials with mock data1
- Transcriptomics1
- ViralZone1
- Workshop1
- additional reading1
- didactic activities1
- hackathon1
- implementation guidelines1
- slide deck / presentation1
- slides / presentation1
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- Related resource
- Associated Training Datasets327
- Associated Workflows306
- Jupyter Notebook (with Solutions)53
- Jupyter Notebook (without Solutions)53
- Input datasets34
- Research Data Management in Life Sciences11
- Associated slides9
- The Carpentries7
- Development in Galaxy slides6
- Quarto/RMarkdown Notebook6
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Slides4
- Variant Analysis dataset4
- Assembly slides3
- DMPonline3
- Data Stewardship Wizard3
- Workshop recording3
- ChIP-Seq data analysis dataset2
- DisProt2
- Epigenetics dataset2
- Galaxy Server administration slides2
- Genome Annotation dataset2
- Metagenomics dataset2
- OpenCloning2
- Sequence analysis slides2
- pydna2
- ARROWSMITH1
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- COBRA Toolbox1
- CanCOGeN1
- Chipster1
- Contributing to the Galaxy Training Material slides1
- DMPortal1
- DS Wizard ELIXIR-Norway 1
- Data Visualisation (theory) 1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- ENA1
- Event1
- FAIR for busy biologists1
- FAIR in (biological) practice1
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Training materials

Running molecular dynamics simulations using NAMD

Setting up molecular systems

Circos

High Performance Computing for Pairwise Genome Comparison

Essential genes detection with Transposon insertion sequencing

Refining Genome Annotations with Apollo

Introduction to CRISPR screen analysis

Genome annotation with Prokka

Visualizations: JavaScript Plugins

Scripting Galaxy using the API and BioBlend