Training materials
-
Documentation, Exercise, Handout, Scripts
ADER18F - Analysis of Differential Expression with RNAseq (First course in 2018)
•• IntermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ELB18F - Entry level Bioinformatics (First course in 2018)
• BeginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• IntermediateData retrieval Data handling Bioinformatics Biology Biological databases -
Documentation, Exercise, Handout, Scripts
3DAROC18 - 3C-based data analysis and 3D reconstruction of chromatin folding (2018)
•• IntermediateHi-C -
Documentation, Exercise, Handout, Scripts
ABSTAT18 - Advanced Biostatistics for Bioinformatics Tool Users using R (2018)
•• IntermediateStatistics and probability -
Documentation, Exercise, Handout, Scripts
PGDH18 - Population Genetics and Demographic History: model-based approaches (2018)
•• IntermediatePopulation Genomics Phylogenetics -
Documentation, Exercise, Handout, Scripts
PSLS20 - Practical Statistics for the Life Sciences (2020)
•• IntermediateStatistics General Linear Models -
Talk
Discussion about unit testing
-
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• BeginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Documentation, API reference
bio.tools documentation
• BeginnerBioinformatics Data curation and archival Computational biology Ontology and terminology Data retrieval Tools Curation Software Sofware curation Tool curation