Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Data management246
    • Metadata management246
    • Research data management (RDM)246
    • Genome annotation230
    • Exomes208
    • Genomes208
    • Genomics208
    • Personal genomics208
    • Synthetic genomics208
    • Viral genomics208
    • Whole genomes208
    • Comparative transcriptomics191
    • Transcriptome191
    • Transcriptomics191
    • MicroRNA sequencing173
    • RNA sequencing173
    • RNA-Seq173
    • RNA-Seq analysis173
    • Small RNA sequencing173
    • Small RNA-Seq173
    • Small-Seq173
    • Transcriptome profiling173
    • WTSS173
    • Whole transcriptome shotgun sequencing173
    • miRNA-seq173
    • FAIR data165
    • Findable, accessible, interoperable, reusable data165
    • R153
    • R program153
    • R script153
    • Bayesian methods148
    • Biostatistics148
    • Descriptive statistics148
    • Gaussian processes148
    • Inferential statistics148
    • Markov processes148
    • Multivariate statistics148
    • Probabilistic graphical model148
    • Probability148
    • Statistics148
    • Statistics and probability148
    • Algorithms129
    • Computer programming129
    • Data structures129
    • Programming languages129
    • Software development129
    • Software engineering129
    • High-throughput sequencing116
    • Chromosome walking115
    • Clone verification115
    • DNA-Seq115
    • DNase-Seq115
    • High throughput sequencing115
    • NGS115
    • NGS data analysis115
    • Next gen sequencing115
    • Next generation sequencing115
    • Panels115
    • Primer walking115
    • Sanger sequencing115
    • Sequencing115
    • Targeted next-generation sequencing panels115
    • Active learning92
    • Ensembl learning92
    • Kernel methods92
    • Knowledge representation92
    • Machine learning92
    • Neural networks92
    • Recommender system92
    • Reinforcement learning92
    • Supervised learning92
    • Unsupervised learning92
    • Bioinformatics91
    • Metagenomics82
    • Shotgun metagenomics82
    • Python78
    • Python program78
    • Python script78
    • py78
    • Bottom-up proteomics76
    • Discovery proteomics76
    • MS-based targeted proteomics76
    • MS-based untargeted proteomics76
    • Metaproteomics76
    • Peptide identification76
    • Protein and peptide identification76
    • Proteomics76
    • Quantitative proteomics76
    • Targeted proteomics76
    • Top-down proteomics76
    • Biodiversity69
    • Single-cell genomics62
    • Single-cell sequencing62
    • Data rendering61
    • Data visualisation61
    • Antimicrobial stewardship56
    • Medical microbiology56
    • Microbial genetics56
    • Microbial physiology56
    • Microbial surveillance56
    • Show N_FILTERS more
    • Operation
    • Data handling57
    • File handling57
    • File processing57
    • Processing57
    • Report handling57
    • Utility operation57
    • Data extraction18
    • Data retrieval18
    • Data retrieval (metadata)18
    • Metadata retrieval18
    • Retrieval18
    • Data visualisation16
    • Molecular visualisation16
    • Plotting16
    • Rendering16
    • Visualisation16
    • Data analysis13
    • Annotation11
    • Data brokering11
    • Data deposition11
    • Data deposition brokering11
    • Data submission11
    • Database deposition11
    • Database submission11
    • Mathematical modelling11
    • Modelling and simulation11
    • Data management planning8
    • Database retrieval8
    • Query8
    • Query and retrieval8
    • Quality control5
    • Validation5
    • Allele calling4
    • Database search4
    • Exome variant detection4
    • Functional enrichment analysis4
    • GSEA4
    • Gene set analysis4
    • Gene-set enrichment analysis4
    • Gene-set over-represenation analysis4
    • Genome variant detection4
    • Germ line variant calling4
    • Methylation analysis4
    • Methylation profile analysis4
    • Mutation detection4
    • Normalisation4
    • Search4
    • Somatic variant calling4
    • Standardisation4
    • Standardisation and normalisation4
    • Variant calling4
    • Variant mapping4
    • de novo mutation detection4
    • Data formatting2
    • Data reformatting2
    • Design2
    • File format conversion2
    • File formatting2
    • File reformatting2
    • Format conversion2
    • Ontology browsing2
    • Ontology visualisation2
    • Peptide database search2
    • Peptide identification2
    • Peptide-spectrum-matching2
    • RNA-Seq analysis2
    • Alignment1
    • Alignment construction1
    • Alignment generation1
    • Biological network analysis1
    • Biological network modelling1
    • Biological network prediction1
    • Classification1
    • Comparison1
    • Data editing1
    • Data filtering1
    • Expression analysis1
    • Expression data analysis1
    • Functional genome annotation1
    • Gene expression analysis1
    • Gene expression data analysis1
    • Gene expression regulation analysis1
    • Genome annotation1
    • Image analysis1
    • Metagenome annotation1
    • Metagenomic inference1
    • Microarray data analysis1
    • Multiple alignment1
    • Multiple sequence alignment1
    • Network analysis1
    • Network comparison1
    • Network modelling1
    • Network prediction1
    • Network simulation1
    • Network topology simulation1
    • Protein expression analysis1
    • Protein secondary structure visualisation1
    • RNA secondary structure visualisation1
    • Read pre-processing1
    • Sequence classification1
    • Show N_FILTERS more
    • Tool
    • Galaxy364
    • Bioconductor242
    • FastQC36
    • Data Stewardship Wizard30
    • SAMtools27
    • MultiQC26
    • BWA21
    • REDCap20
    • BEDTools17
    • fastp16
    • scikit-learn16
    • JBrowse15
    • SCANPY15
    • Falco14
    • Cutadapt13
    • DeepTools13
    • ggplot213
    • BLAST12
    • QUAST12
    • RDMkit12
    • BUSCO11
    • RStudio11
    • STAR11
    • GEMINI10
    • Galaxy Image Analysis10
    • scikit-image10
    • taxonomy_krona_chart10
    • FreeBayes9
    • NanoPlot9
    • Trimmomatic9
    • Bandage8
    • FASTX-Toolkit8
    • BCFtools7
    • BamTools7
    • Biopython7
    • HISAT27
    • Ontology Lookup Service7
    • Trim Galore7
    • msConvert7
    • seqtk7
    • European Nucleotide Archive (ENA)6
    • Flye6
    • MAFFT6
    • MaxQuant6
    • Minimap26
    • Open Babel6
    • Unicycler6
    • Workflow4Metabolomics6
    • gffread6
    • BridgeDb5
    • COPASI5
    • DESeq25
    • Galactic Circos5
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • SRA Software Toolkit5
    • Salmon5
    • StringTie5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • gffcompare5
    • kraken25
    • xcms5
    • Bowtie 24
    • Bwa-mem24
    • CellProfiler4
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • QualiMap4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • bx-python4
    • mothur4
    • snpEff4
    • Apollo3
    • Bakta3
    • Bracken3
    • BridgeDbR3
    • Cardinal3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • OMERO3
    • R3
    • Show N_FILTERS more
    • Standard database or policy
    • FAIRsharing6
    • RDA DMP Common Standard for Machine-Actionable Data Management Plans5
    • European Nucleotide Archive4
    • NCBI Gene4
    • Bioconductor3
    • Ensembl3
    • Common Workflow Language2
    • DisProt2
    • Minimum Information about Plant Phenotyping Experiment2
    • OBO Foundry2
    • Ontology Lookup Service2
    • PRoteomics IDEntifications database2
    • STRING: functional protein association networks2
    • Search Tool for Interactions of Chemicals2
    • The European Genome-phenome Archive2
    • The Observational Medical Outcomes Partnership Common Data Model2
    • eNanoMapper Ontology2
    • Wheat Data Interoperability Guidelines 1
    • BRENDA1
    • BcForms Grammar1
    • Bioschemas1
    • BpForms Grammar1
    • BridgeDb1
    • Cellosaurus1
    • Chemical Entities of Biological Interest1
    • Crop Ontology1
    • Datanator1
    • FAIR sharing1
    • FAIRtracks1
    • Gene3D1
    • Genomics England | PanelApp1
    • HumanMine1
    • IUPAC International Chemical Identifier1
    • Identifiers.org Registry1
    • Integrated resource of protein families, domains and functional sites1
    • Investigation Study Assay JSON1
    • Investigation Study Assay Tabular1
    • MDL molfile Format1
    • MGnify1
    • ModelArchive1
    • Multi-Crop Passport Descriptors1
    • ObjTables1
    • Observational Medical Outcomes Partnership Standard Vocabulary1
    • PRINTS1
    • Plant Phenotype Experiment Ontology1
    • Research Object Crate1
    • Resource Identification Portal 1
    • SUPERFAMILY1
    • Schema.org1
    • Simplified Molecular Input Line Entry Specification Format1
    • Stress Knowledge Map1
    • Structural Classification Of Proteins1
    • The FAIR Principles1
    • The Human Metabolome Database1
    • UniProt Knowledgebase1
    • Wheat Trait Ontology1
    • Wikidata1
    • WorkflowHub1
    • Worldwide Protein Data Bank1
    • Zenodo 1
    • data.eNanoMapper.net1
    • i2b2-patient_visit_dimensions1
    • neXtProt1
    • Show N_FILTERS more
    • Content provider
    • GTN832
    • Glittr.org831
    • European Bioinformatics Institute (EBI)489
    • Bioconductor242
    • IFB French Institute of Bioinformatics149
    • ERGA Knowledge Hub128
    • SIB Swiss Institute of Bioinformatics115
    • GOBLET110
    • Australian BioCommons88
    • Bioinformatics Visualization72
    • ELXIR-UK DaSH70
    • Software Carpentry70
    • Bioinformatics and Biomathematics Training Hub62
    • NGS Registry60
    • DTLS - Dutch Techcentre For Life Sciences41
    • VIB Training & Conferences38
    • de.NBI35
    • Data Carpentry34
    • Khan Academy Statistics32
    • BY-COVID31
    • VIB Bioinformatics Core30
    • Canadian Bioinformatics Workshops26
    • ELIXIR24
    • Coding for Reproducible Research (CfRR)19
    • Coursera19
    • VBCF BioComp19
    • ELIXIR Portugal18
    • CINECA PROJECT17
    • CSC - IT Center for Science13
    • ELIXIR Norway13
    • ELIXIR Estonia12
    • PerMedCoE12
    • NBIS11
    • VHP4Safety10
    • eNanoMapper10
    • Bioschemas9
    • EMBL-ABR9
    • NanoCommons9
    • Barcelona Supercomputing Center (BSC)8
    • Centre for Digital Life Norway8
    • Department of Bioinformatics - BiGCaT, Maastricht University8
    • Genome 3D8
    • InterMine8
    • Centre for Genomic Regulation (CRG)7
    • BioData.pt6
    • Data Steward team Ghent University6
    • ELIXIR Luxembourg6
    • ELIXIR-SI eLearning Platform (EeLP)6
    • ELIXIR: The Czech Republic Node6
    • Danish National Health Data Science Sandbox5
    • ELIXIR Slovenia5
    • LIPID MAPS5
    • UNIVERSE-HPC project5
    • COG-Train4
    • Proteomics Academy4
    • University of Cambridge Bioinformatics Training4
    • ELIXIR AAI3
    • Novo Nordisk Foundation Center for Protein Research3
    • Pattern Institute3
    • University of Edinburgh3
    • DeiC – Danish e-Infrastructure Cooperation2
    • SciLifeLab2
    • Software Sustainability Institute2
    • The Carpentries2
    • Biomedical Sciences Research Center "Alexander Fleming"1
    • CNAG-CRG1
    • Cloud-SPAN1
    • EOSC4Cancer1
    • ExCALIBUR1
    • FAIRsharing1
    • Fraunhofer FIT1
    • Future Learn1
    • Health-RI1
    • NYU Langone Health1
    • Open Science MOOC1
    • Seqera1
    • UCLouvain Bioinformatics Platform1
    • VIB Conferences1
    • WikiPathways1
    • proteomicsML1
    • Show N_FILTERS more
    • Keyword
    • R331
    • Genomics168
    • Transcriptomics160
    • Python149
    • RNA-seq127
    • Next generation sequencing119
    • Data management104
    • Bioinformatics98
    • Statistics80
    • FAIR data77
    • FAIR70
    • Galaxy Server administration68
    • Machine learning68
    • Reproducibility68
    • Data science67
    • Single-cell sequencing61
    • Unix/Linux61
    • Proteomics56
    • jupyter-notebook55
    • Workflows54
    • data management54
    • Data visualization51
    • Version control51
    • Foundations of Data Science50
    • Variant analysis50
    • biodiversity47
    • metagenomics47
    • Development in Galaxy45
    • Statistics and machine learning45
    • Genome assembly43
    • Galaxy41
    • Single Cell41
    • microgalaxy41
    • Metagenomics39
    • training39
    • General36
    • Genome annotation36
    • Rare Diseases & Research36
    • FAIR Data, Workflows, and Research33
    • Microbiome33
    • QC33
    • Nextflow32
    • Genome Annotation31
    • Ecology30
    • programming30
    • Assembly28
    • FAIR principles28
    • Genome28
    • Metadata28
    • Molecular28
    • Alignment27
    • Contributing to the Galaxy Training Material27
    • Data analysis27
    • Phylogenetics27
    • Using Galaxy and Managing your Data27
    • biohackaton 201827
    • Epigenetics26
    • Long read sequencing26
    • RDM26
    • bioinformatics26
    • Docker25
    • Data reuse24
    • Annotation23
    • Containerization23
    • data stewardship23
    • ChIP-seq22
    • High performance computing22
    • Metabolomics22
    • Microbiology22
    • Shiny22
    • metadata22
    • NGS21
    • Open Science21
    • RNA-Seq21
    • Spatial transcriptomics21
    • ansible21
    • reproducible research21
    • BAM20
    • FASTQ20
    • Research Data Management20
    • life-sciences20
    • sensitive data19
    • CfRR19
    • Cloud computing19
    • Differential-expression19
    • FAIR Data19
    • Imaging19
    • Pre-processing19
    • REDCap19
    • Sequence analysis19
    • git-gat19
    • scientific computing19
    • Artificial intelligence18
    • Comparative genomics18
    • Data sharing18
    • Programming18
    • Variant Analysis18
    • interactive-tools18
    • transcriptomics18
    • work-in-progress18
    • Show N_FILTERS more
    • Competency level
    • Not specified3041
    • Beginner970
    • Intermediate283
    • Advanced51
    • Show N_FILTERS more
    • Licence
    • License Not Specified2523
    • Creative Commons Attribution 4.0 International1249
    • Creative Commons Attribution Share Alike 4.0 International145
    • MIT License130
    • GNU General Public License v3.0 only50
    • Creative Commons Attribution Non Commercial No Derivatives 4.0 International45
    • Creative Commons Zero v1.0 Universal44
    • Creative Commons Attribution Non Commercial Share Alike 4.0 International42
    • Other (Not Open)24
    • Apache License 2.017
    • Other (Non-Commercial)15
    • BSD 3-Clause "New" or "Revised" License14
    • Creative Commons Attribution Non Commercial 4.0 International12
    • Other (Attribution)6
    • Creative Commons Attribution 1.0 Generic5
    • Other (Open)4
    • CeCILL Free Software License Agreement v2.13
    • Creative Commons Attribution No Derivatives 4.0 International3
    • Artistic License 2.02
    • GNU Affero General Public License v3.0 only2
    • GNU General Public License v2.0 only2
    • Academic Free License v3.01
    • Creative Commons Attribution 2.0 Generic1
    • Creative Commons Attribution No Derivatives 2.0 Generic1
    • Creative Commons Attribution Non Commercial 2.0 Generic1
    • Creative Commons Attribution Non Commercial Share Alike 2.0 Generic1
    • Do What The F*ck You Want To Public License1
    • Open Data Commons Attribution License v1.01
    • The Unlicense1
    • Show N_FILTERS more
    • Target audience
    • Students573
    • Researchers240
    • PhD students189
    • Biologists, Genomicists, Computer Scientists170
    • Post-Doctoral Fellows165
    • Clinicians128
    • Galaxy Administrators113
    • Graduate students88
    • Graduate Students82
    • Life Science Researchers79
    • Biologists55
    • Instructors52
    • post-docs48
    • Novice44
    • bioinformaticians42
    • Bioinformaticians34
    • PhD candidate27
    • Intermediate26
    • Scientific community26
    • beginner bioinformaticians26
    • Data Managers23
    • Data stewards23
    • PhD candidates23
    • Scientists22
    • Bench biologists19
    • PhD Students18
    • Academia/ Research Institution17
    • Data Scientists17
    • Industry17
    • Non-Profit Organisation17
    • Beginners16
    • Data Scientist16
    • Data managers16
    • Trainers16
    • life scientists16
    • Healthcare15
    • health professionals13
    • Master students13
    • Research Scientists13
    • Researcher in life sciences13
    • data stewards13
    • Biomedical Researchers12
    • Computational biologists12
    • Researcher12
    • healthcare professionals12
    • software developers, bioinformaticians12
    • Post Docs11
    • biocurators11
    • Biomedical researchers9
    • Life scientists9
    • Training Designers9
    • Training instructors9
    • biologists9
    • Health Care Professionals8
    • Life Scientists8
    • Patient Advocates 8
    • PhD8
    • modelers8
    • rare disease patients representatives7
    • Beginner7
    • Bioinformatician7
    • Life scientists with programming skills7
    • All postgraduates6
    • Clinical Scientists6
    • PI6
    • computational scientists6
    • data managers6
    • plant researchers6
    • project manager6
    • Chemists5
    • General Interest5
    • Professors5
    • Undergraduate students5
    • genomics researchers5
    • postdocs5
    • postgrad5
    • Anyone wishing to use bioinformatics resources to find basic information about a virus.4
    • Biologists with little or no prior computational experience4
    • Curators4
    • Laboratory technicians4
    • PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members4
    • Postgraduate students4
    • Professor4
    • Veterinarians4
    • data steward / data manager4
    • postdoctoral researchers4
    • researchers4
    • systems biologists4
    • Bioinformatician, Bioanalysts3
    • Data Steward3
    • Database users3
    • General Physicians3
    • Industry Professionals3
    • Ontologists3
    • Policy makers3
    • Postdocs and Staff members3
    • Researchers and bioinformaticians in other projects interested in depositiong data at the EGA3
    • Technicians3
    • geneticists3
    • life science researchers3
    • Show N_FILTERS more
    • Author
    • Helena Rasche127
    • Bérénice Batut111
    • SIB Swiss Institute of Bioinformatics107
    • Martin Morgan97
    • Saskia Hiltemann66
    • The Carpentries Incubator52
    • Björn Grüning50
    • Simon Gladman37
    • The Gulbenkian Training Programme in Bioinformatics36
    • bioinformatics.ca35
    • bebatut32
    • bgruening32
    • Anthony Bretaudeau28
    • Anton Nekrutenko28
    • Yvan Le Bras28
    • Nate Coraor27
    • Subina Mehta27
    • Donat Agosti25
    • John Chilton25
    • Julia Giora25
    • Nicola Soranzo25
    • Plazi Verein25
    • Teaching materials at the Harvard Chan Bioinformatics Core25
    • Saskia Lawson-Tovey24
    • The Carpentries24
    • Egon Willighagen22
    • Fotis E. Psomopoulos21
    • Michelle Brazas21
    • NBIS - National Bioinformatics Infrastructure Sweden20
    • posit-conf-202320
    • Anne Fouilloux19
    • Coding for Reproducible Research Initiative19
    • Marie Josse19
    • Wendi Bacon19
    • Bazante Sanders18
    • Katarzyna Kamieniecka18
    • Krzysztof Poterlowicz18
    • Laura Cooper18
    • Terri Attwood18
    • UC Davis Bioinformatics Core Training Page18
    • András Aszódi17
    • Data Carpentry17
    • Mehmet Tekman17
    • posit::conf(2024)17
    • shiltemann17
    • Paul Zierep16
    • Wandrille Duchemin16
    • Cristóbal Gallardo15
    • Samaha, Georgina15
    • Sergio Martínez Cuesta15
    • Alexander Botzki14
    • Julia Jakiela14
    • Maria Doyle14
    • Mijke Jetten14
    • Monique Zahn14
    • Pratik Jagtap14
    • nekrut14
    • CRUK CI Bioinformatics Core13
    • Dave Clements13
    • Delphine Lariviere13
    • Donny Vrins13
    • James Johnson13
    • Katherine Do13
    • Personalized Health Informatics Group13
    • Wolfgang Maier13
    • Andrew Mason12
    • Celia van Gelder12
    • Jenny Drnevich @jenny12
    • Korbinian Bösl12
    • Marius van den Beek12
    • Melanie Föll12
    • Patricia Palagi12
    • Simon Andrews12
    • Simon Bray12
    • Anup Kumar11
    • Eija Korpelainen11
    • Khaled Jum'ah11
    • Mathieu Bourgey11
    • Pavankumar Videm11
    • Various11
    • Allegra Via10
    • Canadian Bioinformatics Workshops10
    • Daniel Blankenberg10
    • Federico Bianchini10
    • Fred Hutch Data Science Lab10
    • Martin Čech10
    • Paul Yorke10
    • Anika Erxleben9
    • David Wishart9
    • ELIXIR Estonia9
    • Jared Simpson9
    • Lucille Delisle9
    • Praveen Kumar9
    • allegra.via Via9
    • rstudio::conf(2022)9
    • Anne Pajon8
    • Avans Hogeschool8
    • Bastian Schiffthaler @bastian8
    • Boris Steipe8
    • Diana Pilvar8
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann594
    • Helena Rasche501
    • Björn Grüning420
    • Bérénice Batut263
    • Nicola Soranzo179
    • Martin Čech128
    • Anthony Bretaudeau107
    • Cristóbal Gallardo104
    • Niall Beard90
    • Toby Hodges79
    • Wendi Bacon77
    • Nate Coraor70
    • François Michonneau68
    • Armin Dadras64
    • Gildas Le Corguillé63
    • Erin Becker62
    • Marius van den Beek60
    • William Durand59
    • Zhian N. Kamvar58
    • Mine Cetinkaya-Rundel56
    • Robert Andrews55
    • Simon Gladman54
    • Katrin Leinweber53
    • Raniere Silva53
    • Tracy Teal53
    • W. Trevor King51
    • Andy Boughton50
    • maneesha50
    • Beatriz Serrano-Solano49
    • Katie Anne Mills48
    • Teresa Müller48
    • Maxim Belkin47
    • Lucille Delisle46
    • Mehmet Tekman46
    • Yvan Le Bras45
    • Canadian Bioinformatics Workshops43
    • David Pérez-Suárez43
    • Gabriel A. Devenyi43
    • Munazah Andrabi43
    • Abby Cabunoc Mayes42
    • EvanWill42
    • Ian Lee42
    • Jon Pipitone42
    • Jonah Duckles42
    • Michael Hansen42
    • Piotr Banaszkiewicz42
    • Brandon Curtis41
    • David Mawdsley41
    • Greg Wilson41
    • Jemma Stachelek41
    • Remi Rampin41
    • Allen Lee40
    • Andrew Sanchez40
    • Michael R. Crusoe40
    • Pavankumar Videm40
    • Jeff Oliver39
    • Joel Nothman39
    • Nick Young39
    • naught10139
    • James Allen38
    • Rémi Emonet38
    • William L. Close38
    • Rayna M Harris37
    • Marie Josse36
    • Wolfgang Maier36
    • Melanie Föll35
    • Sarah Brown35
    • Gerard Capes33
    • Anup Kumar32
    • Maria Doyle32
    • trk31
    • Ana Conrado29
    • K.E. Koziar29
    • Stephan Druskat29
    • Simon Bray28
    • Subina Mehta28
    • Alex Whan27
    • Renato Alves27
    • Christina K.26
    • Paula Andrea Martinez26
    • Anne Fouilloux25
    • Michael Joseph25
    • Anthony Gitter24
    • Donny Vrins24
    • João Rodrigues24
    • Geert van Geest23
    • Peter van Heusden23
    • Julia Jakiela21
    • Sarah Stevens21
    • Wolmar Nyberg Åkerström21
    • actions-user21
    • Henry Schreiner20
    • Hilmar Lapp20
    • Robert Davey20
    • Bazante Sanders19
    • Leonid Kostrykin19
    • The Gulbenkian Training Programme in Bioinformatics19
    • Anton Nekrutenko18
    • Elin Kronander18
    • Niclas Jareborg18
    • Show N_FILTERS more
    • Resource type
    • e-learning740
    • Recorded webinar301
    • Video199
    • slides191
    • Tutorial133
    • Training materials77
    • Presentation66
    • Course materials62
    • Webinar62
    • Slides60
    • Talk53
    • lessons53
    • tutorial50
    • hands-on tutorial38
    • video38
    • Slidedeck32
    • course materials31
    • Documentation30
    • exercise26
    • Scripts20
    • Exercise18
    • Handout17
    • Lecture16
    • Poster16
    • PDF14
    • Slideshow14
    • E-learning10
    • E-Learning8
    • Jupyter notebook7
    • Series of videos6
    • FREE online course6
    • Online material6
    • Bioinformatics5
    • Coding5
    • online course5
    • online modules5
    • tutorials5
    • youtube video5
    • examples4
    • podcast4
    • Book3
    • Computational Biology3
    • Computer Science3
    • Computer Software3
    • Data Science3
    • Education3
    • How-to guide3
    • Learning pathway3
    • Life Sciences Literature Database3
    • Mock data3
    • Programming3
    • online tutorial3
    • scripts3
    • slideck/ presentation3
    • API reference2
    • Installation instructions2
    • Manual2
    • Open educational resource2
    • Series of videos2
    • Vignette2
    • case studies2
    • e-Learning2
    • educational materials2
    • handbook2
    • knowledgebase2
    • presentation2
    • workflow2
    • Blog post1
    • Carpentries style curriculum1
    • E-learning + workshop1
    • Educational Resource1
    • Jupyter notebooks1
    • Life Science Literature Database1
    • Machine Learning1
    • Metadata Registry1
    • Notes1
    • Quiz1
    • R Shiny application1
    • Recording1
    • Tool1
    • Toolkit1
    • Training materials with mock data1
    • Transcriptomics1
    • ViralZone1
    • Workshop1
    • additional reading1
    • didactic activities1
    • hackathon1
    • implementation guidelines1
    • slide deck / presentation1
    • slides / presentation1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets326
    • Associated Workflows305
    • Jupyter Notebook (with Solutions)53
    • Jupyter Notebook (without Solutions)53
    • Input datasets34
    • Research Data Management in Life Sciences11
    • Associated slides9
    • The Carpentries7
    • Development in Galaxy slides6
    • Quarto/RMarkdown Notebook6
    • Proteomics dataset5
    • Sequence analysis dataset5
    • Transcriptomics dataset5
    • Assembly dataset4
    • Slides4
    • Variant Analysis dataset4
    • Assembly slides3
    • DMPonline3
    • Data Stewardship Wizard3
    • Workshop recording3
    • ChIP-Seq data analysis dataset2
    • DisProt2
    • Epigenetics dataset2
    • Galaxy Server administration slides2
    • Genome Annotation dataset2
    • Metagenomics dataset2
    • OpenCloning2
    • Sequence analysis slides2
    • pydna2
    • ARROWSMITH1
    • Beacon v2: a discovery tool for genomic and pheno-clinical data1
    • COBRA Toolbox1
    • CanCOGeN1
    • Chipster1
    • Contributing to the Galaxy Training Material slides1
    • DMPortal1
    • DS Wizard ELIXIR-Norway 1
    • Data Visualisation (theory) 1
    • DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
    • EGA Submitter Portal Tutorial1
    • ELIXIR's Impact Toolkit1
    • ENA1
    • Event1
    • FAIR for busy biologists1
    • FAIR in (biological) practice1
    • FAIRplus FAIRification wizard1
    • GEEM1
    • GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
    • Galaxy project guided tours1
    • Genome Annotation slides1
    • Genomics England PanelApp1
    • GitHub1
    • HoloFood Project1
    • Introduction to Galaxy Analyses dataset1
    • Introduction to Galaxy dataset1
    • Introduction to the EGA and sharing sensitive data1
    • MGnify1
    • MetaboLights1
    • MobiDB1
    • Next generation biobanking ontology (NGBO)1
    • OpenRefine1
    • Public Health Alliance for Genomic Epidemiology1
    • R basics1
    • RCN Open data policy 1
    • RDMkit1
    • REPET image Docker1
    • RNA-seq data package1
    • Ready For BioData Management?1
    • Recoding1
    • Slides for Introduction to statistics with R 1
    • Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
    • Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
    • Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
    • Slides | Introduction to the EGA and sharing sensitive data1
    • Statistics dataset1
    • Transcriptomics slides1
    • User Interface and Features dataset1
    • VEIS webinar: The essentials of DUO codes | Presentation1
    • VEIS webinar: The essentials of DUO codes | Video1
    • Video Walkthrough of the Poster1
    • Video of the course1
    • Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
    • Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
    • compareMS21
    • elabFTW1
    • recorded guidance on how to install a SciNote account1
    • recorded intro to hackathon1
    • recorded presentation on integration of ELNs in nanosciences1
    • seq-seq-pan1
    • Show N_FILTERS more
    • Node
    • Switzerland1110
    • EMBL-EBI512
    • United Kingdom226
    • France158
    • Belgium86
    • Netherlands85
    • Germany43
    • Czech Republic32
    • Portugal30
    • Norway24
    • Estonia22
    • Finland22
    • Spain21
    • Sweden18
    • Cyprus16
    • Slovenia16
    • Luxembourg9
    • Italy8
    • Denmark7
    • Greece4
    • Israel1
    • Show N_FILTERS more
    • Collection
    • PHENotyping and EnviroTyping (PHENET training collection)20
    • ELIXIR Biodiversity Community19
    • PINK project18
    • RDMbites: REDCap18
    • HemaFAIR Training: Applying FAIR Principles in Hematology Research16
    • RDMbites: Data management essentials13
    • ELIXIR Toxicology Community11
    • RDMbites: Image data11
    • ELIXIR SIS-Containers - collection of training materials10
    • ELIXIR Federated Human Data Community9
    • ELIXIR Systems Biology Community: training events and materials9
    • RDMbites: Sequencing data9
    • Elements of Data Management7
    • Byte-sized RSE series5
    • RDMbites: Sensitive data5
    • SARS-CoV-2 : Studying a new virus5
    • RDMbites: Equality, Diversity, Inclusion and Justice in RDM4
    • Single-cell Omics Community - collection of courses and materials4
    • VEIS - Value of the EGA for Industry and Society4
    • Impact of research infrastructures2
    • 523BET - Nhà Cái 523BET Casino Uy Tín Nhất Việt Nam1
    • ELIXIR hCNV community - collection of courses and materials.1
    • VIP138 SLOT Online Terbaik saat ini di Indonesia1
    • Show N_FILTERS more
    • Status
    • Active330
    • Archived18
    • Under development4
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Hide materials with broken links
  • Hide archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Include archived: true

and Include broken links: true

4345 materials found
  • Day 4 - RNA-Seq Analysis

    ELIXIR node event
    Exploratory-analysis Differential-expression Statistical-model Annotation
  • Statistics and RNA-Seq

    ELIXIR node event
    FASTQ Alignment BAM Differential-expression Statistical-model Exploratory-analysis
  • Introduction to RNA-seq analysis 2014

    ELIXIR node event
    Alignment Differential-expression Feature-summarisation Pre-processing QC
  • Introduction to R practice codes

    ELIXIR node event
    R-programming
  • R/Bioconductor installation and upgrade guide

    ELIXIR node event
    R-programming
  • RNA-seq training PSB 2013

    ELIXIR node event
    Alignment Differential-expression Feature-summarisation Pre-processing QC
  • Material for the course RNA-seq data analysis with Chipster

    ELIXIR node event
    RNA-Seq RNA-Seq FASTQ QC Pre-processing Alignment BAM Expression-estimation Feature-summarisation Differential-expression …
  • RNA-seq module Bert Overduin

    ELIXIR node event
    RNA-Seq RNA-Seq Pre-processing QC Alignment
  • Nicolas Delhomme and Bastian Schiffthaler

    ELIXIR node event
    RNA-Seq FASTQ GFF3 BAM Populus-tremula RNA-Seq Pre-processing QC Alignment Annotation …
  • Expression estimation

    ELIXIR node event
    RNA-Seq GFF3 BAM Populus-tremula RNA-Seq Expression-estimation
  • 1
  • 2
  • …
  • 427
  • 428
  • 429
  • 430
  • 431
  • 432
  • 433
  • 434
  • 435
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.