Training materials
-
Example “Variant Calling”
-
Mapping Quality Control
Alignment BAM QC
-
Day 3 - RNA-Seq Analysis
QC Exploratory-analysis Differential-expression Statistical-model Pre-processing
-
RNA-Seq
-
ChIP-Seq
ChIP-Seq Experimental-design QC ChIP-Seq-QC Data-format Alignment Peak-calling Differential-binding Annotation
-
Tutorial
RNA-Seq FASTQ GFF3 BAM Populus-tremula RNA-Seq Pre-processing QC Alignment Annotation …
-
Prerequisite
Statistics and probability Unix Linux R-programming Statistics
-
Intro to R and Bioconductor
Prerequisite R-programming
-
Preprocessing RNA-Seq data
Pre-processing
-
RNA-Seq Analysis with Biocluster and R
RNA-Seq RNA-Seq Alignment Annotation BAM Differential-expression Exploratory-analysis Expression-estimation FASTA FASTQ …