Training materials
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hds-sandbox/RDM_biodata_course
Data management FAIR data Sequencing Data management FAIR data Next generation sequencing
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e-learning
Decontamination of a genome assembly
• BeginnerSequence assembly Genomics Biodiversity Assembly biodiversity -
e-learning
Assembly of the mitochondrial genome from PacBio HiFi reads
• BeginnerSequence assembly Genomics Biodiversity Mitochondria Assembly biodiversity -
Tutorial, Training materials, Bioinformatics
How to use REPET software for de novo annotation of transposable elements in genomes
• BeginnerGenomics Structural variation Bioinformatics Genome annotation Sequence classification Transposons Annotation Pipelines Docker -
Tutorial
Registering SwissLipids identifiers in Wikidata
Chemistry lipids Wikidata -
tutorial
Registering Datasets in Wikidata
• BeginnerFAIR data Wikidata -
Interactive Visualisation with Python
•• Intermediatedata visualisation training torsten schwede & thierry sengstag group -
Applied-Genomics-UTD/docs
Workflows ChIP-seq Epigenetics Genomics RNA-Seq Workflows Snakemake Reproducibility Unix/Linux ATAC-seq …
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stephenturner/workshops
Genomics Statistics and probability Data visualisation R markdown RNA-Seq R Data visualization Rmarkdown RNA-seq Genomics …
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e-learning
Genome annotation with Helixer
•• IntermediateGenomics Biodiversity Zoology Plant biology Genome Annotation biodiversity eukaryota helixer jbrowse1