Training materials
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e-learning
Pretraining a Large Language Model (LLM) from Scratch on DNA Sequences
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Optimizing DNA Sequences for Biological Functions using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress -
e-learning
Fine-tuning a LLM for DNA Sequence Classification
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Predicting Mutation Impact with Zero-shot Learning using a pretrained DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Generating Artificial Yeast DNA Sequences using a DNA LLM
•• IntermediateStatistics and probability Large Language Model Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Foundational Aspects of Machine Learning using Python
•• IntermediateStatistics and probability Statistics and machine learning ai-ml elixir jupyter-notebook -
e-learning
Neural networks using Python
•• IntermediateStatistics and probability Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress -
e-learning
Deep Learning (without Generative Artificial Intelligence) using Python
•• IntermediateStatistics and probability Statistics and machine learning ai-ml elixir jupyter-notebook work-in-progress -
e-learning
Single Cell Publication - Data Plotting
••• AdvancedContributing to the Galaxy Training Material R jupyter-notebook rmarkdown-notebook -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• Beginner10x MIGHTS Single Cell jupyter-notebook paper-replication