Training materials
-
e-learning
Essential genes detection with Transposon insertion sequencing
• BeginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq -
e-learning
Genome annotation with Maker
••• AdvancedGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Functional annotation of protein sequences
• BeginnerGenomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote -
e-learning
Genome annotation with Maker (short)
•• IntermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• IntermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 biodiversity gmod jbrowse1 microgalaxy … -
e-learning
CRISPR screen analysis
• BeginnerGenomics CRISPR Genome Annotation cell line essential genes genome editing -
e-learning
Genome annotation with Prokka
• BeginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
e-learning
Masking repeats with RepeatMasker
• BeginnerGenomics Sequence composition, complexity and repeats Genome Annotation biodiversity eukaryote -
e-learning
Set up a Galaxy for Training
• BeginnerTeaching and Hosting Galaxy training -
e-learning
Genome annotation with Funannotate
•• IntermediateGenomics Gene and protein families Genome Annotation biodiversity eukaryote gmod jbrowse1