Training materials
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ELIXIR TeSS
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• IntermediateGenetic variation Variant Analysis covid19 one-health virology -
ELIXIR TeSS
e-learning
Identification of somatic and germline variants from tumor and normal sample pairs
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
••• AdvancedGenetic variation Variant Analysis cyoa -
ELIXIR TeSS
e-learning
M. tuberculosis Variant Analysis
•• IntermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote … -
ELIXIR TeSS
e-learning
Calling variants in non-diploid systems
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
ELIXIR TeSS
e-learning
Microbial Variant Calling
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
ELIXIR TeSS
e-learning
Calling variants in diploid systems
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Calling very rare variants
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Genomic Data Visualisation with JBrowse
•• IntermediateVisualisation gmod jbrowse1 -
ELIXIR TeSS
e-learning
Visualisation with Circos
•• IntermediateVisualisation