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Tools: Minimap2

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6 materials found

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e-learning

Query an annotated mobile genetic element database to identify and annotate genetic elements (e.g. plasmids) in metagenomics data

• Beginner
Metagenomics Microbial ecology Genomics Microbiology Sequence analysis Mobile genetic elements Microbiome
e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• Beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

ERGA post-assembly QC

• Beginner
Sequence assembly Genomics Biodiversity Assembly QC animals assembly biodiversity genome plants
Pan genomics tutorial using Minima2 and seq-seq-pan

• Beginner
pan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment
e-learning

Large genome assembly and polishing

• Beginner
Sequence assembly Genomics Biodiversity Assembly assembly biodiversity nanopore plants polishing
e-learning

Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step

•• Intermediate
Sequence assembly Genomics Biodiversity Assembly VGP biodiversity eukaryote pacbio