Materials - TeSS (Training eSupport System)

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- Clustal 1.8 (Clustal W, Clustal X)3
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- GenomeScope 2.03
- GraPhlAn3
- InterProScan (EBI)3
- OMArk3
- Ontology Lookup Service3
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- FAIRsharing4
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- European Nucleotide Archive3
- Ontology Lookup Service2
- PRoteomics IDEntifications database2
- STRING: functional protein association networks2
- Search Tool for Interactions of Chemicals2
- The European Genome-phenome Archive2
- Bioschemas1
- Cellosaurus1
- Common Workflow Language1
- FAIRtracks1
- Investigation Study Assay JSON1
- Investigation Study Assay Tabular1
- Minimum Information about Plant Phenotyping Experiment1
- ModelArchive1
- Research Object Crate1
- Resource Identification Portal 1
- Schema.org1
- The Observational Medical Outcomes Partnership Common Data Model1
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- GTN702
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- Canadian Bioinformatics Workshops25
- Coding for Reproducible Research (CfRR)19
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- PerMedCoE5
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- Novo Nordisk Foundation Center for Protein Research3
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- Keyword
- Bioinformatics68
- Galaxy Server administration68
- jupyter-notebook54
- Foundations of Data Science50
- Transcriptomics49
- biodiversity46
- Development in Galaxy45
- Statistics and machine learning43
- Proteomics41
- Single Cell41
- microgalaxy41
- Genomics40
- data management35
- Data management34
- FAIR Data, Workflows, and Research33
- Genome Annotation31
- Ecology30
- FAIR data30
- Microbiome30
- Contributing to the Galaxy Training Material27
- Using Galaxy and Managing your Data27
- Assembly25
- Data reuse24
- FAIR24
- metagenomics24
- R23
- Workflows22
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- ansible21
- FAIR principles20
- programming20
- CfRR19
- FAIR Data19
- Metadata19
- git-gat19
- reproducible research19
- scientific computing19
- Imaging18
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- Variant Analysis18
- interactive-tools18
- Climate17
- Data analysis17
- Teaching and Hosting Galaxy training17
- work-in-progress17
- Data sharing16
- Genome annotation16
- HemaFAIR16
- Introduction to Galaxy Analyses16
- data stewardship16
- fair16
- jbrowse116
- sensitive data15
- Epigenetics15
- Next generation sequencing15
- REDCap15
- Reproducibility15
- earth-system15
- elixir15
- gmod15
- prokaryote15
- Online Repository14
- RNA-seq14
- Data mining13
- Metabolomics13
- Python13
- Research Data Management13
- Sequence analysis13
- metadata13
- Deep learning12
- Machine learning12
- assembly12
- cyoa12
- paper-replication12
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- Analysis11
- European research projects11
- MIGHTS11
- Nextflow11
- REMBI11
- covid1911
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- eukaryote10
- nanopore10
- ocean10
- plants10
- workflows10
- DDA9
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- Visualisation9
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- Galaxy Community Building8
- Genome assembly8
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- Variant analysis8
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- Beginner703
- Not specified349
- Intermediate163
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- Creative Commons Attribution 4.0 International
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- Creative Commons Attribution Share Alike 4.0 International140
- MIT License117
- GNU General Public License v3.0 only50
- Creative Commons Zero v1.0 Universal41
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- Creative Commons Attribution Non Commercial No Derivatives 4.0 International24
- Apache License 2.017
- Other (Not Open)16
- BSD 3-Clause "New" or "Revised" License14
- Creative Commons Attribution Non Commercial 4.0 International10
- Creative Commons Attribution 1.0 Generic5
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- Artistic License 2.02
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- GNU General Public License v2.0 only2
- Other (Open)2
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- Do What The F*ck You Want To Public License1
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- Target audience
- Students565
- Galaxy Administrators113
- Instructors52
- Researchers35
- Scientific community26
- PhD candidate25
- Data stewards21
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- Data managers16
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- All postgraduates4
- Anyone wishing to use bioinformatics resources to find basic information about a virus.4
- Bioinformatician4
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- data steward / data manager4
- Biologists with little or no prior computational experience3
- Data Scientists3
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- Professors3
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- Bioinformaticians, Biologists with little or no prior computational experience.2
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- Database users2
- Graduate students2
- PhD Students or young researchers in molecular biology and/or genetics with little or no background in bioinformatics.2
- Research scientists2
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- data manager2
- life science researchers2
- life scientists2
- plant researchers2
- policy officer2
- Anyone1
- Anyone dealing with cell lines with no or little knowledge of the Cellosaurus resource.1
- Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities1
- Anyone wishing to interpret graphs showing the progression of COVID-19.1
- Beginner informatics1
- Clinical Scientists1
- DMP writers1
- Data Manager1
- Data scientists1
- Developers wanting to distribute their MPI dependent software1
- ECR1
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- General Interest1
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- IT support1
- Imaging Core Facility Staff1
- Librarians1
- Life sciences1
- Life scientists1
- Life scientists with no or little knowledge of the ISMARA tool.1
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.1
- Modellers1
- Node Coordinators1
- Novice users of HPC and anyone who expects to need to use HPC systems at some stage in their research1
- OMERO trainers1
- OMERO users1
- PhD1
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members1
- Policy makers1
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- Author
- Helena Rasche127
- Bérénice Batut111
- Saskia Hiltemann65
- Björn Grüning49
- Simon Gladman33
- Anthony Bretaudeau28
- Anton Nekrutenko28
- Yvan Le Bras28
- Nate Coraor27
- Subina Mehta26
- Donat Agosti25
- John Chilton25
- Julia Giora25
- Nicola Soranzo25
- Plazi Verein25
- SIB Swiss Institute of Bioinformatics25
- The Carpentries23
- Fotis E. Psomopoulos21
- Saskia Lawson-Tovey20
- Anne Fouilloux19
- Coding for Reproducible Research Initiative19
- Marie Josse19
- Wendi Bacon19
- Bazante Sanders18
- Katarzyna Kamieniecka18
- Krzysztof Poterlowicz18
- Laura Cooper17
- Mehmet Tekman17
- Paul Zierep16
- The Gulbenkian Training Programme in Bioinformatics16
- Cristóbal Gallardo15
- Samaha, Georgina15
- Monique Zahn14
- Pratik Jagtap14
- Dave Clements13
- Delphine Lariviere13
- Donny Vrins13
- Julia Jakiela13
- Maria Doyle13
- Mijke Jetten13
- Wolfgang Maier13
- James Johnson12
- Katherine Do12
- Marius van den Beek12
- Melanie Föll12
- Simon Bray12
- Anup Kumar11
- Khaled Jum'ah11
- Pavankumar Videm11
- Daniel Blankenberg10
- Korbinian Bösl10
- Martin Čech10
- Anika Erxleben9
- Celia van Gelder9
- Egon Willighagen9
- Federico Bianchini9
- Praveen Kumar9
- Anne Pajon8
- Avans Hogeschool8
- Diana Pilvar8
- Emma Leith8
- Fred Hutch Data Science Lab8
- Joachim Wolff8
- Kaivan Kamali8
- Lucille Delisle8
- Robert Andrews8
- Sara Morsy8
- Stéphanie Robin8
- Timothy J. Griffin8
- Alex Ostrovsky7
- Alexander Botzki7
- Alexandre Cormier7
- Anna Syme7
- Branka Franicevic7
- Christopher Barnett7
- Diana Chiang Jurado7
- Erwan Corre7
- Florian Christoph Sigloch7
- Gildas Le Corguillé7
- Laura Leroi7
- Leonid Kostrykin7
- Matthias Fahrner7
- Michael Charleston7
- Nadia Goué7
- Nazeefa Fatima7
- Patricia Palagi7
- Ray Sajulga7
- Allegra Via6
- Andrew Mason6
- Beatriz Serrano-Solano6
- Beecroft, Sarah6
- Clemens Blank6
- Coline Royaux6
- Deshpande, Nandan6
- ELIXIR Goblet Train the Trainers6
- Jeremy Goecks6
- Junhao Qiu6
- Morgan Howells6
- Paulo Cilas Morais Lyra Junior6
- Philippe Rocca-Serra6
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- Contributor
- Saskia Hiltemann588
- Helena Rasche501
- Björn Grüning419
- Bérénice Batut254
- Nicola Soranzo171
- Martin Čech128
- Anthony Bretaudeau106
- Cristóbal Gallardo104
- Niall Beard90
- Wendi Bacon77
- Nate Coraor70
- Armin Dadras64
- Gildas Le Corguillé63
- Marius van den Beek60
- William Durand59
- Simon Gladman53
- Teresa Müller48
- Beatriz Serrano-Solano47
- Lucille Delisle46
- Mehmet Tekman46
- Yvan Le Bras44
- Pavankumar Videm40
- Robert Andrews40
- Marie Josse36
- Wolfgang Maier36
- Melanie Föll35
- Munazah Andrabi34
- Anup Kumar32
- Simon Bray28
- Subina Mehta28
- Anne Fouilloux24
- Donny Vrins24
- Maria Doyle23
- Peter van Heusden23
- Julia Jakiela20
- Bazante Sanders19
- Leonid Kostrykin19
- Anton Nekrutenko18
- Tristan Reynolds18
- Deepti Varshney17
- Khaled Jum'ah17
- Paul Zierep17
- Delphine Lariviere16
- Geert van Geest16
- Petros Kountouris16
- Pratik Jagtap16
- David López14
- Marisa Loach14
- Mira Kuntz14
- Mélanie Petera14
- Matthias Bernt13
- Candace Savonen12
- Daniela Schneider12
- Pablo Moreno12
- Timothy J. Griffin12
- Carrie Wright11
- Dave Clements11
- Diana Chiang Jurado11
- Gianmauro Cuccuru11
- Katarzyna Kamieniecka11
- Stéphanie Robin11
- jhudsl-robot11
- Wandrille D.10
- actions-user10
- Anna Syme9
- John Chilton9
- Kate Isaac9
- Mallory Freeberg9
- Paul De Geest9
- Alexandre Cormier8
- Amirhossein Naghsh Nilchi8
- Florian Heyl8
- Kaivan Kamali8
- Melissa Burke8
- Solenne Correard8
- Verena Moosmann8
- Allyson Lister7
- Christopher Barnett7
- Daniel Sobral7
- Hans-Rudolf Hotz7
- Katherine Do7
- Morgan Howells7
- Tomas Klingström7
- Bert Droesbeke6
- Catherine Bromhead6
- Clemens Blank6
- Ekaterina Polkh6
- Enis Afgan6
- Florian Christoph Sigloch6
- Linelle Abueg6
- Paulo Cilas Morais Lyra Junior6
- Riccardo Massei6
- Alex Ostrovsky5
- Alireza Khanteymoori5
- Andrea Bagnacani5
- Clea Siguret5
- Deepak Tanwar5
- Elizabeth Humphries5
- Fabio Cumbo5
- John Davis5
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- e-learning549
- slides182
- Presentation47
- tutorial47
- Video39
- lessons37
- Training materials32
- Slidedeck27
- exercise25
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- video21
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- Documentation16
- Handout16
- Lecture16
- Scripts16
- Tutorial11
- Online material4
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- tutorials4
- Recorded webinar3
- course materials3
- slideck/ presentation3
- Course materials2
- Series of videos2
- online course2
- youtube video2
- Carpentries style curriculum1
- Coding1
- Computational Biology1
- E-Learning1
- Jupyter notebooks1
- Learning pathway1
- Open educational resource1
- Poster1
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- case studies1
- didactic activities1
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- implementation guidelines1
- scripts1
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- Related resource
- Associated Training Datasets325
- Associated Workflows304
- Jupyter Notebook (with Solutions)51
- Jupyter Notebook (without Solutions)51
- Quarto/RMarkdown Notebook6
- DMPonline2
- DisProt2
- Research Data Management in Life Sciences2
- Slides2
- Workshop recording2
- ARROWSMITH1
- DS Wizard ELIXIR-Norway 1
- Data Stewardship Wizard1
- Data Visualisation (theory) 1
- Event1
- FAIR for busy biologists1
- FAIR in (biological) practice1
- R basics1
- RCN Open data policy 1
- RDMkit1
- RNA-seq data package1
- Ready For BioData Management?1
- Video Walkthrough of the Poster1
- Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
- Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
- compareMS21
- recorded guidance on how to install a SciNote account1
- recorded intro to hackathon1
- recorded presentation on integration of ELNs in nanosciences1
- seq-seq-pan1
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- Node
- Switzerland141
- United Kingdom62
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- Collection
- HemaFAIR Training: Applying FAIR Principles in Hematology Research16
- ELIXIR Biodiversity Community15
- RDMbites: REDCap14
- RDMbites: Data management essentials13
- RDMbites: Image data10
- Elements of Data Management7
- PINK project7
- SARS-CoV-2 : Studying a new virus5
- RDMbites: Equality, Diversity, Inclusion and Justice in RDM4
- RDMbites: Sensitive data4
- ELIXIR SIS-Containers - collection of training materials3
- RDMbites: Sequencing data3
- ELIXIR Systems Biology Community: training events and materials2
- ELIXIR Toxicology Community2
- 523BET - Nhà Cái 523BET Casino Uy Tín Nhất Việt Nam1
- ELIXIR hCNV community - collection of courses and materials.1
- ELIXIR Federated Human Data Community1
- PHENotyping and EnviroTyping (PHENET training collection)1
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