- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Genome annotation100
- Exomes93
- Genomes93
- Genomics93
- Personal genomics93
- Synthetic genomics93
- Viral genomics93
- Whole genomes93
- R89
- R program89
- R script89
- Comparative transcriptomics86
- Transcriptome86
- Transcriptomics86
- MicroRNA sequencing79
- RNA sequencing79
- RNA-Seq79
- RNA-Seq analysis79
- Small RNA sequencing79
- Small RNA-Seq79
- Small-Seq79
- Transcriptome profiling79
- WTSS79
- Whole transcriptome shotgun sequencing79
- miRNA-seq79
- Data management72
- Metadata management72
- Research data management (RDM)72
- Chromosome walking65
- Clone verification65
- DNA-Seq65
- DNase-Seq65
- High throughput sequencing65
- High-throughput sequencing65
- NGS65
- NGS data analysis65
- Next gen sequencing65
- Next generation sequencing65
- Panels65
- Primer walking65
- Sanger sequencing65
- Sequencing65
- Targeted next-generation sequencing panels65
- Bayesian methods51
- Biostatistics51
- Descriptive statistics51
- Gaussian processes51
- Inferential statistics51
- Markov processes51
- Multivariate statistics51
- Probabilistic graphical model51
- Probability51
- Statistics51
- Statistics and probability51
- Active learning48
- Ensembl learning48
- Kernel methods48
- Knowledge representation48
- Machine learning48
- Neural networks48
- Recommender system48
- Reinforcement learning48
- Supervised learning48
- Unsupervised learning48
- Python40
- Python program40
- Python script40
- py40
- FAIR data38
- Findable, accessible, interoperable, reusable data38
- Single-cell genomics33
- Single-cell sequencing33
- Antimicrobial stewardship32
- Bioinformatics32
- Medical microbiology32
- Microbial genetics32
- Microbial physiology32
- Microbial surveillance32
- Microbiological surveillance32
- Microbiology32
- Molecular infection biology32
- Molecular microbiology32
- Metagenomics31
- Shotgun metagenomics31
- Data rendering30
- Data visualisation30
- Pipelines28
- Software integration28
- Tool integration28
- Tool interoperability28
- Workflows28
- Protein bioinformatics26
- Protein databases26
- Protein informatics26
- Proteins26
- Protein structure22
- Protein structure analysis22
- Protein tertiary structure22
- Rare diseases21
- Variant pattern analysis21
- Show N_FILTERS more
-
-
-
Tool
- Bioconductor23
- BridgeDb4
- Chipster4
- Data Stewardship Wizard3
- RDMkit3
- BridgeDbR2
- InterMine2
- InterMineR2
- BridgeDb API1
- CARNIVAL1
- CellNOptR1
- Cufflinks1
- Cytoscape1
- Data Information System (DAISY)1
- HumanMine1
- MSFragger1
- MouseMine1
- PathVisio1
- ProteinProspector1
- RCy31
- TargetMine1
- UCSC Genome Browser1
- WikiPathways1
- Show N_FILTERS more
-
-
-
Standard database or policy
- NCBI Gene4
- Ensembl2
- BRENDA1
- BridgeDb1
- Chemical Entities of Biological Interest1
- European Nucleotide Archive1
- FAIRsharing1
- Genomics England | PanelApp1
- HumanMine1
- Identifiers.org Registry1
- Integrated resource of protein families, domains and functional sites1
- Observational Medical Outcomes Partnership Standard Vocabulary1
- PRINTS1
- RDA DMP Common Standard for Machine-Actionable Data Management Plans1
- Stress Knowledge Map1
- The Human Metabolome Database1
- The Observational Medical Outcomes Partnership Common Data Model1
- Wikidata1
- WorkflowHub1
- eNanoMapper Ontology1
- i2b2-patient_visit_dimensions1
- Show N_FILTERS more
-
-
-
Content provider
- Glittr.org497
- European Bioinformatics Institute (EBI)473
- GOBLET107
- GTN90
- SIB Swiss Institute of Bioinformatics78
- Bioinformatics Visualization72
- Software Carpentry70
- ERGA Knowledge Hub55
- de.NBI35
- Khan Academy Statistics32
- BY-COVID25
- Bioconductor24
- Coursera18
- IFB French Institute of Bioinformatics17
- Bioschemas9
- Data Carpentry9
- VHP4Safety9
- eNanoMapper9
- CSC - IT Center for Science7
- InterMine6
- NanoCommons6
- Centre for Genomic Regulation (CRG)5
- LIPID MAPS5
- Department of Bioinformatics - BiGCaT, Maastricht University4
- ELIXIR4
- ELIXIR Norway4
- Bioinformatics and Biomathematics Training Hub3
- PerMedCoE3
- VIB Training & Conferences3
- Australian BioCommons2
- Barcelona Supercomputing Center (BSC)2
- BioData.pt2
- CINECA PROJECT2
- DTLS - Dutch Techcentre For Life Sciences2
- ELIXIR Portugal2
- ELIXIR: The Czech Republic Node2
- Biomedical Sciences Research Center "Alexander Fleming"1
- ELIXIR AAI1
- ELIXIR Luxembourg1
- ExCALIBUR1
- NBIS1
- UCLouvain Bioinformatics Platform1
- UNIVERSE-HPC project1
- University of Cambridge Bioinformatics Training1
- WikiPathways1
- Show N_FILTERS more
-
-
-
Keyword
- R191
- Genomics79
- Python76
- Transcriptomics68
- Next generation sequencing67
- RNA-seq66
- Data management46
- Statistics45
- Data science42
- Reproducibility36
- FAIR data34
- Machine learning33
- Unix/Linux33
- Single-cell sequencing32
- training30
- Data visualization29
- Genome28
- Molecular28
- Version control27
- Bioinformatics24
- Metagenomics24
- Variant analysis22
- FAIR21
- Workflows21
- Rare Diseases & Research20
- Genome assembly19
- General18
- Phylogenetics18
- life-sciences17
- Containerization16
- Microbiology15
- Anatomy Physiology and Atlases14
- Programming14
- Shell13
- Spatial transcriptomics13
- Docker12
- Introduction12
- Pathway12
- health-informatics12
- Cells and Organisms11
- Cloud computing11
- Europe PMC11
- Genome annotation11
- High performance computing11
- Introduction bioinformatics11
- Long read sequencing11
- Nextflow11
- plant phenotyping11
- Extras10
- Literature search10
- Python biologists10
- data management10
- databases10
- genes and genomes10
- Comparative genomics9
- FAIRsharing9
- computer-science9
- policies9
- reproducibility9
- standards9
- Artificial intelligence8
- Biomedical Literature8
- Epidemiology8
- Galaxy8
- Git8
- Inferential statistics8
- NGS8
- PDBe8
- Pathways and Networks8
- Populations8
- Proteomics8
- Quarto8
- Regex8
- Rmarkdown8
- Snakemake8
- algorithms8
- medicine and health8
- programming8
- ChIP-seq7
- Image analysis7
- Information visualisation7
- Intro7
- Make7
- Multiple sequence alignment7
- Protein families7
- Ref7
- Systems biology7
- next generation sequencing7
- ATAC-seq6
- Biocuration6
- Communication6
- Enrichment analysis6
- Epigenetics6
- Genome sequencing6
- Julia6
- Multiomics6
- Network analysis6
- Population genetics6
- Protein sequence analysis6
- Sequence alignments6
- Show N_FILTERS more
-
-
-
Competency level
- Not specified1625
- Beginner96
- Intermediate52
- Advanced15
- Show N_FILTERS more
-
-
-
Licence
- License Not Specified
- Creative Commons Attribution 4.0 International1240
- Creative Commons Attribution Share Alike 4.0 International140
- MIT License118
- GNU General Public License v3.0 only50
- Creative Commons Zero v1.0 Universal41
- Creative Commons Attribution Non Commercial Share Alike 4.0 International38
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International24
- Apache License 2.017
- Other (Not Open)16
- BSD 3-Clause "New" or "Revised" License14
- Creative Commons Attribution Non Commercial 4.0 International10
- Creative Commons Attribution 1.0 Generic5
- Creative Commons Attribution No Derivatives 4.0 International3
- Artistic License 2.02
- GNU Affero General Public License v3.0 only2
- GNU General Public License v2.0 only2
- Other (Open)2
- Creative Commons Attribution 2.0 Generic1
- Creative Commons Attribution No Derivatives 2.0 Generic1
- Creative Commons Attribution Non Commercial 2.0 Generic1
- Creative Commons Attribution Non Commercial Share Alike 2.0 Generic1
- Do What The F*ck You Want To Public License1
- Open Data Commons Attribution License v1.01
- The Unlicense1
- Show N_FILTERS more
-
-
-
Target audience
- PhD students138
- Clinicians119
- Novice44
- Researchers27
- Intermediate26
- Biologists23
- Biologists, Genomicists, Computer Scientists19
- post-docs18
- Life Science Researchers17
- Bench biologists14
- Beginners13
- Post-Doctoral Fellows13
- bioinformaticians13
- beginner bioinformaticians12
- Graduate Students11
- health professionals9
- Health Care Professionals6
- PhD6
- biocurators6
- Bioinformaticians5
- Trainers5
- healthcare professionals5
- Biomedical researchers4
- General Interest4
- Laboratory technicians4
- Patient Advocates 4
- Veterinarians4
- postdocs4
- postgrad4
- rare disease patients representatives3
- Clinical Scientists3
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members3
- PhD candidates3
- Post Docs3
- Researchers and bioinformaticians in other projects interested in depositiong data at the EGA3
- Scientists3
- Undergraduate students3
- data managers3
- data stewards3
- postdoc3
- software developers, bioinformaticians3
- Data Managers2
- General Physicians2
- Genomics data science PhD students2
- Graduate students2
- PhD Students2
- Postgraduate students2
- Researcher in life sciences2
- Toxicologists2
- biology and bioinformatics sophomore undergraduates2
- geneticists2
- genomics researchers2
- life scientists2
- medical students2
- plant researchers2
- researchers2
- service administrators in organizations that want to make use of ELIXIR AAI 2
- Academia/ Research Institution1
- All postgraduates1
- Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities1
- Anyone wants to start using the Unix/Linux OS1
- Bachelor students1
- Beginner1
- Beginner informatics1
- Biochemists1
- Bioinformatician1
- Bioinformatician, Bioanalysts1
- Bioinformatics1
- Biologists with little or no prior computational experience1
- Bioscientists1
- Biotechnology Companies1
- Chemists1
- Data Access Committeses from the EGA1
- Data Scientists1
- Data stewards1
- Developers1
- Educators1
- Fellows and Residents1
- Grad students1
- Healthcare1
- Healthcare professionals1
- High School Students1
- Industry1
- Lecturers1
- Life Scientists1
- Life sciences1
- Life scientists1
- Master students1
- Microbiologists1
- Neurological1
- Non-Profit Organisation1
- Ontologists1
- Operators, developers and managers of bioinformatics resources1
- Paediatricians1
- PhD students in Genomics datascience1
- PhD students, computer scientists, bioinformaticians and developers who need to maintain/extend existing tools or develop new tools for Galaxy. 1
- Postgraduate Students1
- Primary care doctors1
- Principal Investigators1
- Principal Investigators (PIs)1
- Show N_FILTERS more
-
-
-
Author
- SIB Swiss Institute of Bioinformatics79
- The Carpentries Incubator52
- bioinformatics.ca35
- bebatut27
- bgruening25
- Michelle Brazas21
- The Gulbenkian Training Programme in Bioinformatics20
- Terri Attwood18
- Data Carpentry17
- Teaching materials at the Harvard Chan Bioinformatics Core15
- Martin Morgan14
- NBIS - National Bioinformatics Infrastructure Sweden14
- Wandrille Duchemin14
- shiltemann13
- nekrut12
- Canadian Bioinformatics Workshops10
- Egon Willighagen10
- Geert van Geest10
- Paul Yorke10
- allegra.via Via9
- CRUK CI Bioinformatics Core8
- Maria Levchenko7
- pajanne7
- stortebecker7
- Biocore@CRG6
- Dayane Araujo6
- Philippe Le Mercier6
- Software Carpentry6
- erxleben6
- joachimwolff6
- Aidan Budd5
- Bioinformatics, Rockefeller University5
- Deepak Tanwar5
- Eija Korpelainen5
- Hadley Wickham5
- Manuel Corpas5
- Marie-Claude Blatter5
- MolSSI Education5
- Robin Engler5
- Sergio Martínez Cuesta5
- The Carpentries Lab5
- Thuong Van Du Tran5
- blankclemens5
- erasche5
- nsoranzo5
- posit-conf-20235
- slugger705
- Alex's Lemonade Stand Foundation4
- András Aszódi4
- BioNT Training4
- Computational Biology and Bioinformatics at UCLouvain4
- Elisabeth Gasteiger4
- Markus Müller4
- Rami Krispin4
- malloryfreeberg4
- tnabtaf4
- yvanlebras4
- BU-ISCIII3
- Bruno Gaeta3
- ELIXIR Europe Training3
- Erik Hjerde3
- Frédéric Burdet3
- Joana Carlevaro3
- Joana Carlevaro Fita3
- Julien Roux3
- Lukas Weber3
- Maria Lehtivaara3
- Maria Victoria ...3
- Mark Fernandes3
- Mark Robinson3
- Mick Watson3
- NovaMechanics Ltd3
- R Programming @ University of Cincinnati3
- RStudio Education3
- Rafael A Irizarry3
- Roger D. Peng3
- abretaud3
- martenson3
- moheydarian3
- vivekbhr3
- Ana-Claudia Sima2
- Bradley Boehmke2
- Cloud-SPAN2
- Dan MacLean2
- Daniela Butano2
- Daniele Silvestro2
- David Dalpiaz2
- Denise Slenter2
- Dr Euan McDonnell2
- Dr Eva Caamano-Gutierrez2
- Dr John Heap2
- ELIXIR2
- ELIXIR Estonia2
- Emil Hvitfeldt2
- Erik Bongcam-Rudloff2
- Espen Mikal Robertsen2
- Fred Hutch Data Science Lab2
- Friederike Ehrhart2
- Gos Micklem2
- Grégoire Rossier2
- Show N_FILTERS more
-
-
-
Contributor
- Toby Hodges80
- François Michonneau68
- Erin Becker62
- Zhian N. Kamvar59
- Katrin Leinweber53
- Tracy Teal53
- Raniere Silva52
- W. Trevor King51
- maneesha51
- Andy Boughton50
- Katie Anne Mills47
- Maxim Belkin47
- Canadian Bioinformatics Workshops43
- David Pérez-Suárez43
- Gabriel A. Devenyi43
- Abby Cabunoc Mayes41
- EvanWill41
- Ian Lee41
- Jon Pipitone41
- Jonah Duckles41
- Michael Hansen41
- Piotr Banaszkiewicz41
- Brandon Curtis40
- David Mawdsley40
- Jemma Stachelek40
- Remi Rampin40
- Allen Lee39
- Andrew Sanchez39
- Michael R. Crusoe39
- Greg Wilson38
- James Allen38
- Jeff Oliver38
- Joel Nothman38
- Nick Young38
- Rémi Emonet38
- naught10138
- Rayna M Harris37
- William L. Close37
- Sarah Brown35
- Gerard Capes33
- Renato Alves30
- trk30
- Ana Conrado29
- Stephan Druskat29
- K.E. Koziar28
- Alex Whan27
- Christina K.27
- Paula Andrea Martinez26
- Michael Joseph25
- Anthony Gitter24
- João Rodrigues24
- Sarah Stevens22
- Robert Davey21
- Henry Schreiner20
- Hilmar Lapp20
- The Gulbenkian Training Programme in Bioinformatics19
- Paola Prieto18
- C. Titus Brown17
- Mine Cetinkaya-Rundel17
- Aaron O'Leary16
- Benson Muite15
- Trevor Bekolay15
- Annajiat Alim Rasel14
- Bianca Peterson14
- John Blischak14
- Radhika Khetani14
- Will Gammerdinger14
- Karen Word13
- Laurent Gatto13
- Lex Nederbragt13
- Meeta Mistry13
- Wolmar Nyberg Åkerström13
- zhibinlu13
- Andrew Reid12
- Ethan White12
- JCSzamosi12
- Mark Fernandes12
- Mateusz Kuzak12
- Ariel Rokem11
- Ivan Gonzalez11
- Karen Cranston11
- Kilian Lieret11
- Miguel Cardoso11
- Pete11
- Trevor Keller11
- Amy Brown10
- Edward Wallace10
- Hugo Tavares10
- Jason Williams10
- Jihe Liu10
- Kari L. Jordan, PhD10
- Kunal Marwaha10
- Pete Bachant10
- Stéphane Guillou10
- Taylor Reiter10
- YvonneKallberg10
- Alan O'Callaghan9
- Aleksandra Nenadic9
- Amanda Charbonneau9
- Anelda van der Walt9
- Show N_FILTERS more
-
-
-
Resource type
- Recorded webinar299
- e-learning144
- Video96
- Tutorial87
- Course materials52
- Webinar44
- Slides17
- video16
- Poster14
- Slideshow12
- course materials9
- Training materials7
- Talk5
- Documentation4
- Life Sciences Literature Database3
- Presentation3
- online modules3
- Bioinformatics2
- Coding2
- Computational Biology2
- Computer Science2
- Education2
- Programming2
- Scripts2
- youtube video2
- Blog post1
- Data Science1
- E-Learning1
- Exercise1
- Handout1
- How-to guide1
- Learning pathway1
- Life Science Literature Database1
- Machine Learning1
- Notes1
- PDF1
- Tool1
- Toolkit1
- Transcriptomics1
- Vignette1
- ViralZone1
- educational materials1
- hands-on tutorial1
- knowledgebase1
- online tutorial1
- podcast1
- presentation1
- Show N_FILTERS more
-
-
-
Related resource
- Input datasets32
- Associated slides9
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- Development in Galaxy slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- Beacon v2: a discovery tool for genomic and pheno-clinical data1
- COBRA Toolbox1
- Contributing to the Galaxy Training Material slides1
- Data Stewardship Wizard1
- DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- EGA Submitter Portal Tutorial1
- ELIXIR's Impact Toolkit1
- GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Galaxy Server administration slides1
- Genome Annotation slides1
- Genomics England PanelApp1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- Introduction to the EGA and sharing sensitive data1
- OpenCloning1
- Research Data Management in Life Sciences1
- Slides | Beacon v2: a discovery tool for genomic and pheno-clinical data1
- Slides | DisGeNET: a discovery platform designed to address a variety of questions concerning the genetic underpinning of human diseases1
- Slides | GPAP: the RD-Connect Genome-Phenome Analysis Platform for diagnosis and gene discovery in rare disease research1
- Slides | Introduction to the EGA and sharing sensitive data1
- Statistics dataset1
- Transcriptomics slides1
- User Interface and Features dataset1
- VEIS webinar: The essentials of DUO codes | Presentation1
- VEIS webinar: The essentials of DUO codes | Video1
- Show N_FILTERS more
-
-
-
Collection
- PHENotyping and EnviroTyping (PHENET training collection)19
- ELIXIR Toxicology Community9
- PINK project8
- ELIXIR Federated Human Data Community7
- ELIXIR Systems Biology Community: training events and materials4
- ELIXIR Biodiversity Community3
- ELIXIR SIS-Containers - collection of training materials3
- VEIS - Value of the EGA for Industry and Society3
- Impact of research infrastructures2
- Byte-sized RSE series1
- Single-cell Omics Community - collection of courses and materials1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Show materials with broken links
- Hide archived materials
