Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Comparative transcriptomics5
    • Transcriptome5
    • Transcriptomics5
    • Biological sequences2
    • Community analysis2
    • Environmental microbiology2
    • Metagenomics2
    • MicroRNA sequencing2
    • Microbial ecology2
    • Microbiome2
    • Molecular community analysis2
    • RNA sequencing2
    • RNA-Seq2
    • RNA-Seq analysis2
    • Sequence analysis2
    • Sequence databases2
    • Shotgun metagenomics2
    • Small RNA sequencing2
    • Small RNA-Seq2
    • Small-Seq2
    • Transcriptome profiling2
    • WTSS2
    • Whole transcriptome shotgun sequencing2
    • miRNA-seq2
    • Antimicrobial stewardship1
    • Assembly1
    • Bioinformatics1
    • Bottom-up proteomics1
    • Codon usage1
    • DNA chips1
    • DNA microarrays1
    • DNA variation1
    • Discovery proteomics1
    • Disease1
    • Epidemiology1
    • Exomes1
    • Expression1
    • FAIR data1
    • Findable, accessible, interoperable, reusable data1
    • Gene expression1
    • Gene expression profiling1
    • Gene transcription1
    • Gene translation1
    • Genetic variation1
    • Genome annotation1
    • Genomes1
    • Genomic variation1
    • Genomics1
    • MS-based targeted proteomics1
    • MS-based untargeted proteomics1
    • Medical microbiology1
    • Metaproteomics1
    • Microbial genetics1
    • Microbial physiology1
    • Microbial surveillance1
    • Microbiological surveillance1
    • Microbiology1
    • Mobile genetic elements1
    • Molecular genetics1
    • Molecular infection biology1
    • Molecular microbiology1
    • Mutation1
    • Pathology1
    • Peptide identification1
    • Personal genomics1
    • Pipelines1
    • Polymorphism1
    • Protein and peptide identification1
    • Proteomics1
    • Public health1
    • Public health and epidemiology1
    • Quantitative proteomics1
    • Sequence assembly1
    • Software integration1
    • Somatic mutations1
    • Synthetic genomics1
    • Targeted proteomics1
    • Taxonomy1
    • Tool integration1
    • Tool interoperability1
    • Top-down proteomics1
    • Transcription1
    • Transposons1
    • Viral genomics1
    • Whole genomes1
    • Workflows1
    • Show N_FILTERS more
    • Tool
    • ggplot2
    • Galaxy363
    • FastQC36
    • Data Stewardship Wizard29
    • SAMtools27
    • MultiQC26
    • Bioconductor24
    • BWA21
    • REDCap20
    • BEDTools17
    • fastp16
    • scikit-learn16
    • JBrowse15
    • SCANPY15
    • Falco14
    • Cutadapt13
    • DeepTools13
    • BLAST12
    • QUAST12
    • RDMkit12
    • BUSCO11
    • RStudio11
    • STAR11
    • GEMINI10
    • Galaxy Image Analysis10
    • scikit-image10
    • taxonomy_krona_chart10
    • NanoPlot9
    • Trimmomatic9
    • Bandage8
    • FASTX-Toolkit8
    • FreeBayes8
    • BCFtools7
    • BamTools7
    • Ontology Lookup Service7
    • Trim Galore7
    • msConvert7
    • seqtk7
    • Biopython6
    • European Nucleotide Archive (ENA)6
    • Flye6
    • HISAT26
    • MAFFT6
    • MaxQuant6
    • Minimap26
    • Open Babel6
    • Unicycler6
    • Workflow4Metabolomics6
    • gffread6
    • BridgeDb5
    • COPASI5
    • DESeq25
    • Galactic Circos5
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • SRA Software Toolkit5
    • Salmon5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • kraken25
    • xcms5
    • Bowtie 24
    • Bwa-mem24
    • CellProfiler4
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • QualiMap4
    • StringTie4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • bx-python4
    • gffcompare4
    • mothur4
    • snpEff4
    • Apollo3
    • Bakta3
    • Bracken3
    • BridgeDbR3
    • Cardinal3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • OMERO3
    • R3
    • Show N_FILTERS more
    • Content provider
    • GTN11
    • Centre for Genomic Regulation (CRG)1
    • Pattern Institute1
    • Show N_FILTERS more
    • Keyword
    • Transcriptomics4
    • bulk3
    • Introduction to Galaxy Analyses2
    • Microbiome2
    • PCA2
    • collections2
    • cyoa2
    • mouse2
    • rna-seq2
    • BIoinformatics1
    • Functional enrichment1
    • Heatmap1
    • Nanopore data analysis1
    • Nextflow1
    • Pathogens detection1
    • Phylogenetic tree1
    • Proteomics1
    • QC1
    • Quality Control1
    • RNA-Seq1
    • RNA-seq1
    • RStudio1
    • Single Cell1
    • Using Galaxy and Managing your Data1
    • Variant Analysis1
    • Visualisation1
    • Workflows1
    • clustering1
    • deutsch1
    • drosophila1
    • español1
    • italiano1
    • label-free1
    • microgalaxy1
    • nf-co.re1
    • transcriptomics1
    • work-in-progress1
    • workflows1
    • Show N_FILTERS more
    • Competency level
    • Beginner9
    • Intermediate4
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International12
    • MIT License1
    • Show N_FILTERS more
    • Target audience
    • Students12
    • Bioinformaticians1
    • Biologists1
    • Biologists interested in learning about RNA-seq1
    • Researchers1
    • Show N_FILTERS more
    • Author
    • Bérénice Batut3
    • Saskia Hiltemann3
    • Maria Doyle2
    • Nadia Goué2
    • Anika Erxleben1
    • Anna Delgado Tejedor1
    • Anne Fouilloux1
    • Casper de Visser1
    • Charlotte Adang1
    • Christopher Barnett1
    • Clemens Blank1
    • Dave Clements1
    • Didier Debroas1
    • Engy Nasr1
    • Fabian Andrade Lozano1
    • Isabel Duarte1
    • Julia Ponomarenko1
    • Jörg Wennmann1
    • Luca Cozzuto1
    • Lucille Delisle1
    • Mallory Freeberg1
    • Matthias Fahrner1
    • Melanie Föll1
    • Michele Maroni1
    • Mo Heydarian1
    • Morgan Howells1
    • Nicola Soranzo1
    • Olha Nahorna1
    • Paul Zierep1
    • Pavankumar Videm1
    • Peter van Heusden1
    • Peter-Bram 't Hoen1
    • Sarah Bonnin1
    • Toni Hermoso Pulido1
    • Show N_FILTERS more
    • Contributor
    • Saskia Hiltemann10
    • Björn Grüning8
    • Helena Rasche6
    • Bérénice Batut4
    • Nicola Soranzo3
    • Wolfgang Maier3
    • Amirhossein Naghsh Nilchi2
    • Cristóbal Gallardo2
    • Hans-Rudolf Hotz2
    • Lucille Delisle2
    • Marius van den Beek2
    • Martin Čech2
    • Pavankumar Videm2
    • Wendi Bacon2
    • Alex Ostrovsky1
    • Anika Erxleben1
    • Anne Fouilloux1
    • Anthony Bretaudeau1
    • Antonia Taiani1
    • Armin Dadras1
    • Aysam Guerler1
    • Carlos Chee Mendonça1
    • Clea Siguret1
    • Clemens Blank1
    • Daniela Schneider1
    • David López1
    • Deepti Varshney1
    • Ekaterina Polkh1
    • Engy Nasr1
    • Florian Heyl1
    • Graeme Tyson1
    • Jennifer Hillman-Jackson1
    • John Chilton1
    • Jörg Wennmann1
    • Maria Doyle1
    • Matthias Bernt1
    • Mehmet Tekman1
    • Melanie Föll1
    • Michele Maroni1
    • Morgan Howells1
    • Mélanie Petera1
    • Nadia Goué1
    • Nate Coraor1
    • Niall Beard1
    • Paul Zierep1
    • Peter-Bram 't Hoen1
    • Simon Bray1
    • William Durand1
    • [email protected]1
    • Show N_FILTERS more
    • Resource type
    • e-learning11
    • Course materials1
    • E-Learning1
    • Training materials1
    • hands-on tutorial1
    • Show N_FILTERS more
    • Related resource
    • Associated Workflows11
    • Associated Training Datasets7
    • RNA-seq data package1
    • Show N_FILTERS more
    • Node
    • Spain1
    • Show N_FILTERS more
    • Status
    • Active2
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Hide archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: ggplot2

and Include archived: true

13 materials found
  • e-learning

    MaxQuant and MSstats for the analysis of label-free data

    •• Intermediate
    Proteomics Proteomics label-free
  • e-learning

    Workflow Reports

    •• Intermediate
    Using Galaxy and Managing your Data workflows
  • e-learning

    Galaxy Basics for everyone

    • Beginner
    Introduction to Galaxy Analyses
  • 1
  • 2
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.