Materials - TeSS (Training eSupport System)

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- Computational toxicology6
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- Mathematical modelling5
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- Biological network analysis1
- Biological network modelling1
- Biological network prediction1
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- Functional genome annotation1
- Genome annotation1
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- Molecular visualisation1
- Network analysis1
- Network comparison1
- Network modelling1
- Network prediction1
- Network simulation1
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- Peptide database search1
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- BridgeDb2
- BridgeDbR2
- CARNIVAL2
- CellNOptR2
- PathVisio2
- BioSimulators1
- BridgeDb API1
- COBREXA.jl1
- InterMine1
- InterMineR1
- MGnify1
- MGnify (was EBI Metagenomics)1
- MSFragger1
- PASTEClassifier1
- PhysiCell1
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- edgeR1
- progeny1
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- Standard database or policy
- Common Workflow Language2
- eNanoMapper Ontology2
- Chemical Entities of Biological Interest1
- Ensembl1
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- Investigation Study Assay Tabular1
- Research Object Crate1
- The Human Metabolome Database1
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- Content provider
- GTN64
- PerMedCoE9
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- Department of Bioinformatics - BiGCaT, Maastricht University5
- European Bioinformatics Institute (EBI)2
- LIPID MAPS2
- Pattern Institute2
- eNanoMapper2
- BioData.pt1
- CSC - IT Center for Science1
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- InterMine1
- NanoCommons1
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- Keyword
- HPC6
- Biomodelling3
- ELIXIR RIR, BridgeDb3
- Python3
- Annotation2
- BNGL2
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- COMBINE2
- Identifiers2
- MGnify2
- Metagenomics2
- Microbiology2
- Modeling2
- OMEX2
- Pathway analysis2
- Pathways2
- SBML2
- SED-ML2
- adverse outcome pathway2
- discrete-event simulation2
- dynamic simulations2
- enanomapper2
- lipid maps2
- lipidmaps2
- lipidomics2
- lipids2
- ontologies2
- 16S1
- ARC1
- AberOWL1
- Annotated Research Context1
- Assembly1
- Automated testing1
- BioPortal1
- Biocuration1
- BridgeDb1
- Building blocks1
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- Command-line1
- Comparative genomics1
- Computational modelling1
- Computer Programming1
- Containers1
- DES1
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- Data download1
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- DataPLANT1
- Differential Expression1
- Docker1
- Documentation and help1
- ELIXIR-CONVERGE1
- FAIR1
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- RDM1
- RNA-seq1
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- SARS-CoV-21
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- Competency level
- Not specified83
- Beginner22
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- Licence
- License Not Specified87
- Creative Commons Attribution 4.0 International11
- MIT License5
- Apache License 2.04
- Creative Commons Attribution Share Alike 4.0 International4
- Creative Commons Attribution Non Commercial Share Alike 4.0 International3
- Creative Commons Zero v1.0 Universal3
- Creative Commons Attribution No Derivatives 4.0 International1
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
- GNU General Public License v2.0 only1
- GNU General Public License v3.0 only1
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- Target audience
- Biologists8
- Bioinformaticians4
- Life Science Researchers4
- Bioinformatician3
- Chemists3
- Researchers3
- bioinformaticians3
- Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities2
- Bioinformatician, Bioanalysts2
- Biologists, Genomicists, Computer Scientists2
- Computational biologists2
- Life Scientists2
- PhD students2
- Toxicologists2
- life science researchers2
- modelers2
- post-docs2
- Analysts1
- Data Managers1
- Data Scientists1
- Data stewards1
- Developers wanting to distribute their MPI dependent software1
- Graduates1
- HPC system maintainers wanting to enable MPI containers1
- Microbiologists1
- Novice users of HPC and anyone who expects to need to use HPC systems at some stage in their research1
- PhD students, computer scientists, bioinformaticians and developers who need to maintain/extend existing tools or develop new tools for Galaxy. 1
- Postgraduate students1
- Public Health Professionals1
- Research Software Engineers1
- Scientists1
- Staff1
- Students1
- Users1
- Users wanting to construct MPI containers1
- computational scientists1
- programmers1
- researchers1
- software developers, bioinformaticians1
- software engineers1
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- Author
- bgruening19
- bebatut17
- nekrut12
- Egon Willighagen9
- shiltemann9
- stortebecker7
- joachimwolff6
- blankclemens5
- erxleben5
- slugger705
- malloryfreeberg4
- pajanne4
- David Palecek3
- Denise Slenter3
- Friederike Ehrhart3
- Jonathan Karr3
- moheydarian3
- vivekbhr3
- yvanlebras3
- Bartosz Bartmanski2
- Henrik Nortamo2
- Javi Conejero2
- Jesse Harrison2
- Juan Camilo Arboleda Rivera2
- Lauren Dupuis2
- Martina Kutmon2
- annasyme2
- delphine-l2
- erasche2
- fidelram2
- nsoranzo2
- tnabtaf2
- tseemann2
- yhoogstrate2
- Alex Mitchell1
- Alexander Pico1
- Alexey Nesvizhskii1
- Amy Heather1
- Anders Riutta1
- Andrzej Tkacz1
- Arthur Goldberg1
- COBRA Toolbox development team1
- Clair Castle1
- David Vicente1
- Delphine-L1
- Dipl.-Inform. Bernd Klein1
- Dominik Brilhaus1
- Florian-H-Lab1
- Francesca Morello1
- Guillermo Rangel Pineros1
- Heikki Lehväslaiho1
- Heinrich Lukas Weil1
- Johann Confais1
- Jonathan Mélius1
- Julie Sullivan1
- Kevin Frey1
- Kristina Hanspers1
- Laura Kalliokoski1
- Laurent Heirendt1
- Linda Rieswijk1
- Linde Schoenmaker1
- Lorna Richardson1
- Maria Doyle1
- Martina Summer-Kutmon1
- Marvin Martens1
- Miroslav Kratochvil1
- NickSto1
- Ola Tarkowska1
- Rachel Lyne1
- Raf Winand1
- Rebecca Campos1
- Rob Finn1
- Saad Lodhi1
- Sabrina Zander1
- Sergio Martínez Cuesta1
- Siiri Fuchs1
- St Elmo Wilken1
- Stefano Mangiola1
- Susan Coort1
- Tania Aires1
- Varsha Kale1
- Yo Yehudi1
- bagnacan1
- cmonjeau1
- dmaticzka1
- dpryan791
- dyusuf1
- fabio-cumbo1
- friedue1
- guerler1
- hrhotz1
- jj-umn1
- jmchilton1
- martenson1
- marziacremona1
- natefoo1
- pavanvidem1
- polkhe1
- pratikdjagtap1
- timothygriffin1
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- Contributor
- Bilal Shaikh2
- Ion Moraru2
- Alex Mitchell1
- Alison Harper1
- Cymon Cox1
- Fatemeh Alidoost1
- Gnaneswara Marupilla1
- Guillermo Rangel Pineros1
- INRAE1
- Lorna Richardson1
- Nav Mustafee1
- Ola Tarkowska1
- Rebecca Campos1
- Rob Challen1
- Rob Finn1
- Tiitu Peltola1
- Tom Monks1
- Tom Slater1
- Varsha Kale1
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- Resource type
- Tutorial
- e-learning716
- Recorded webinar301
- Video193
- slides184
- Training materials72
- Presentation62
- Course materials61
- Slides54
- Webinar53
- lessons50
- tutorial48
- hands-on tutorial38
- video38
- Slidedeck32
- Documentation27
- course materials26
- exercise25
- Scripts20
- Exercise18
- Handout17
- Lecture16
- Poster16
- Slideshow13
- E-learning10
- PDF9
- E-Learning8
- Online material6
- Bioinformatics5
- Coding5
- Talk5
- online course5
- tutorials5
- youtube video5
- Series of videos4
- Jupyter notebook4
- online modules4
- Book3
- Computational Biology3
- Computer Science3
- Data Science3
- Education3
- How-to guide3
- Life Sciences Literature Database3
- Mock data3
- Programming3
- examples3
- online tutorial3
- slideck/ presentation3
- API reference2
- Computer Software2
- FREE online course2
- Installation instructions2
- Learning pathway2
- Manual2
- Open educational resource2
- Series of videos2
- Vignette2
- case studies2
- e-Learning2
- educational materials2
- handbook2
- knowledgebase2
- presentation2
- scripts2
- workflow2
- Blog post1
- Carpentries style curriculum1
- E-learning + workshop1
- Educational Resource1
- Jupyter notebooks1
- Life Science Literature Database1
- Machine Learning1
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- Notes1
- R Shiny application1
- Recording1
- Tool1
- Toolkit1
- Training materials with mock data1
- Transcriptomics1
- ViralZone1
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- additional reading1
- didactic activities1
- hackathon1
- implementation guidelines1
- podcast1
- slide deck / presentation1
- slides / presentation1
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- Related resource
- Input datasets32
- Associated slides9
- Proteomics dataset5
- Sequence analysis dataset5
- Transcriptomics dataset5
- Assembly dataset4
- Variant Analysis dataset4
- Assembly slides3
- Development in Galaxy slides3
- ChIP-Seq data analysis dataset2
- Epigenetics dataset2
- Genome Annotation dataset2
- Metagenomics dataset2
- Sequence analysis slides2
- COBRA Toolbox1
- Contributing to the Galaxy Training Material slides1
- Galaxy Server administration slides1
- Genome Annotation slides1
- Introduction to Galaxy Analyses dataset1
- Introduction to Galaxy dataset1
- REPET image Docker1
- Statistics dataset1
- Transcriptomics slides1
- User Interface and Features dataset1
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- Node
- Netherlands18
- Finland3
- EMBL-EBI2
- United Kingdom2
- Belgium1
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- Collection
- ELIXIR Toxicology Community5
- ELIXIR Biodiversity Community1
- ELIXIR Federated Human Data Community1
- PINK project1
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- Status
- Active19
- Under development1
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