Training materials
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e-learning
Introduction to Python
• BeginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Python - Lists & Strings & Dictionaries
• BeginnerSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Advanced Python
•• IntermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Analyse HeLa fluorescence siRNA screen
•• IntermediateImaging Fluorescence microscopy High-throughput screening Image segmentation Image thresholding Imaging Object feature extraction Overlay -
e-learning
Nucleoli segmentation and feature extraction using CellProfiler
•• IntermediateImaging Image segmentation Imaging Multi-channel image Object feature extraction -
e-learning
Object tracking using CellProfiler
•• IntermediateImaging Imaging Isolated object tracking Multi-channel image -
e-learning
Introduction to Image Analysis using Galaxy
• BeginnerImaging Conversion Fluorescence microscopy Image segmentation Image thresholding Imaging Object counting Overlay -
e-learning
Mass spectrometry: LC-MS preprocessing with XCMS
•• IntermediateMetabolomics Metabolomics -
e-learning
Mass spectrometry imaging: Loading and exploring MSI data
• BeginnerProteomics Proteomics imaging mouse -
e-learning
Mass spectrometry imaging: Finding differential analytes
•• IntermediateMetabolomics Metabolomics