Training materials
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ELIXIR TeSS
e-learning
Microbial Variant Calling
• BeginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy … -
ELIXIR TeSS
e-learning
Calling variants in diploid systems
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Calling very rare variants
• BeginnerGenetic variation Variant Analysis -
ELIXIR TeSS
e-learning
Genomic Data Visualisation with JBrowse
•• IntermediateVisualisation gmod jbrowse1 -
ELIXIR TeSS
e-learning
From small to large-scale genome comparison
• BeginnerGenomics Genome Annotation plants prokaryote -
ELIXIR TeSS
e-learning
Visualisation with Circos
•• IntermediateVisualisation -
ELIXIR TeSS
e-learning
Essential genes detection with Transposon insertion sequencing
• BeginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq -
ELIXIR TeSS
e-learning
Functional annotation of protein sequences
• BeginnerGenomics Function analysis Protein sites, features and motifs Genome Annotation biodiversity eukaryote -
ELIXIR TeSS
e-learning
Genome annotation with Maker
••• AdvancedGenomics Genome Annotation eukaryote gmod jbrowse1 maker -
ELIXIR TeSS
e-learning
Genome annotation with Maker (short)
•• IntermediateGenomics Genome Annotation eukaryote gmod jbrowse1 maker