Training materials
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e-learning
Quality and contamination control in bacterial isolate using Illumina MiSeq Data
• BeginnerSequence analysis Whole genome sequencing Genomics Microbiology Microbial ecology Sequence analysis bacteria illumina microgalaxy -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• Intermediate10x Single Cell epigenetics single-cell -
e-learning
Genome-wide alternative splicing analysis
••• AdvancedTranscriptomics Transcriptomics alternative splicing isoform switching -
e-learning
From NDVI data with OpenEO to time series visualisation with Holoviews
• BeginnerEcology Biodiversity Ecology NDVI copernicus earth-system holoviews land degradation -
e-learning
QGIS Web Feature Services
• BeginnerEcology Biodiversity Ecology GIS Geographical Information System OGC WFS biodiversity earth-system maps … -
e-learning
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• BeginnerEcology Biodiversity EML Ecology FAIR biodiversity data paper metadata -
e-learning
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• BeginnerEcology Biodiversity EML Ecology FAIR biodiversity data paper ecology metadata -
e-learning
Converting NCBI Data to the AnnData Format
• BeginnerSingle Cell data import data management -
e-learning
Converting between common single cell data formats
• BeginnerSingle Cell data import data management -
e-learning
Importing files from public atlases
• BeginnerSingle Cell data import data management