Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • MicroRNA sequencing1
    • RNA sequencing1
    • RNA-Seq1
    • RNA-Seq analysis1
    • Small RNA sequencing1
    • Small RNA-Seq1
    • Small-Seq1
    • Transcriptome profiling1
    • WTSS1
    • Whole transcriptome shotgun sequencing1
    • miRNA-seq1
    • Show N_FILTERS more
    • Tool
    • Galaxy363
    • FastQC36
    • Data Stewardship Wizard29
    • SAMtools27
    • MultiQC26
    • Bioconductor24
    • BWA21
    • REDCap20
    • BEDTools17
    • fastp16
    • scikit-learn16
    • JBrowse15
    • SCANPY15
    • Falco14
    • Cutadapt13
    • DeepTools13
    • ggplot213
    • BLAST12
    • QUAST12
    • RDMkit12
    • BUSCO11
    • RStudio11
    • STAR11
    • GEMINI10
    • Galaxy Image Analysis10
    • scikit-image10
    • taxonomy_krona_chart10
    • NanoPlot9
    • Trimmomatic9
    • Bandage8
    • FASTX-Toolkit8
    • FreeBayes8
    • BCFtools7
    • BamTools7
    • Ontology Lookup Service7
    • Trim Galore7
    • msConvert7
    • seqtk7
    • Biopython6
    • European Nucleotide Archive (ENA)6
    • Flye6
    • HISAT26
    • MAFFT6
    • MaxQuant6
    • Minimap26
    • Open Babel6
    • Unicycler6
    • Workflow4Metabolomics6
    • gffread6
    • BridgeDb5
    • COPASI5
    • DESeq25
    • Galactic Circos5
    • MetaPhlAn5
    • MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC5
    • RSeQC5
    • SRA Software Toolkit5
    • Salmon5
    • anndata5
    • annotatemyids5
    • compute_sequence_length5
    • kraken25
    • xcms5
    • Bowtie 24
    • Bwa-mem24
    • CellProfiler4
    • Chipster4
    • Diamond4
    • GOseq4
    • KrakenTools4
    • MACS4
    • MSstats4
    • Merqury4
    • Newick Utilities4
    • QualiMap4
    • StringTie4
    • The Protein Data Bank (PDB)4
    • UniProt4
    • bx-python4
    • gffcompare4
    • mothur4
    • snpEff4
    • Apollo3
    • Bakta3
    • Bracken3
    • BridgeDbR3
    • Cardinal3
    • Clustal 1.8 (Clustal W, Clustal X)3
    • DISEASES3
    • DropletUtils3
    • FastTree3
    • GenomeScope 2.03
    • GraPhlAn3
    • InterMine3
    • InterMineR3
    • InterProScan (EBI)3
    • MGnify (was EBI Metagenomics)3
    • OMArk3
    • OMERO3
    • R3
    • Show N_FILTERS more
    • Content provider
    • GTN1
    • Show N_FILTERS more
    • Keyword
    • Differential Expression1
    • Gene Expression1
    • RNA-seq1
    • Single Cell1
    • Transcriptomics1
    • pseudobulk1
    • transcriptomics1
    • Show N_FILTERS more
    • Competency level
    • Beginner2
    • Show N_FILTERS more
    • Licence
    • Creative Commons Attribution 4.0 International1
    • Creative Commons Attribution Non Commercial Share Alike 4.0 International1
    • Show N_FILTERS more
    • Target audience
    • Biologists1
    • Students1
    • Show N_FILTERS more
    • Author
    • Diana Chiang Jurado1
    • Maria Doyle1
    • Stefano Mangiola1
    • Show N_FILTERS more
    • Contributor
    • Björn Grüning1
    • Diana Chiang Jurado1
    • Pavankumar Videm1
    • Saskia Hiltemann1
    • Show N_FILTERS more
    • Resource type
    • Tutorial1
    • e-learning1
    • Show N_FILTERS more
    • Related resource
    • Associated Training Datasets1
    • Associated Workflows1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Show materials with broken links
  • Hide archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Tools: edgeR

and Include archived: true

2 materials found
  • e-learning

    Pseudobulk Analysis with Decoupler and EdgeR

    • Beginner
    Single Cell pseudobulk transcriptomics
  • Tutorial

    A Tidy Transcriptomics introduction to RNA-Seq analyses

    • Beginner
    RNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.