Materials - TeSS (Training eSupport System)

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- Scientific topic
- Data management28
- Metadata management28
- Research data management (RDM)28
- FAIR data19
- Findable, accessible, interoperable, reusable data19
- Biomedical informatics5
- Clinical informatics5
- Cloud computing5
- Computer science5
- HPC5
- Health and disease5
- Health informatics5
- Healthcare informatics5
- High performance computing5
- High-performance computing5
- Medical informatics5
- Applied ontology4
- Ontologies4
- Ontology4
- Ontology and terminology4
- Ontology relations4
- Open science4
- Terminology4
- Upper ontology4
- Biodiversity2
- Computational ecology2
- Ecoinformatics2
- Ecological informatics2
- Ecology2
- Ecosystem science2
- Pipelines2
- Software integration2
- Tool integration2
- Tool interoperability2
- Workflows2
- Algorithms1
- Computer programming1
- Data clean-up1
- Data cleaning1
- Data governance1
- Data integrity1
- Data quality1
- Data quality management1
- Data structures1
- Dietetics1
- Nutrition1
- Nutrition science1
- Nutritional science1
- Programming languages1
- Software development1
- Software engineering1
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- Operation
- Data handling6
- File handling6
- File processing6
- Processing6
- Report handling6
- Utility operation6
- Normalisation3
- Standardisation3
- Standardisation and normalisation3
- Design2
- Data analysis1
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- Tool
- Data Stewardship Wizard4
- Galaxy4
- InterMine3
- InterMineR3
- EDAM-Browser1
- European Nucleotide Archive (ENA)1
- Falco1
- MultiQC1
- Ontology Lookup Service1
- RDMkit1
- Zooma1
- bio.tools1
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- Standard database or policy
- FAIR sharing1
- FAIRsharing1
- The FAIR Principles1
- WorkflowHub1
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- Content provider
- BY-COVID13
- DTLS - Dutch Techcentre For Life Sciences8
- SIB Swiss Institute of Bioinformatics7
- Australian BioCommons6
- NBIS5
- GTN4
- BioData.pt3
- CINECA PROJECT3
- InterMine3
- ELIXIR2
- University of Edinburgh2
- DeiC – Danish e-Infrastructure Cooperation1
- ELXIR-UK DaSH1
- European Bioinformatics Institute (EBI)1
- FAIRsharing1
- Fraunhofer FIT1
- IFB French Institute of Bioinformatics1
- Software Sustainability Institute1
- de.NBI1
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- Keyword
- FAIR
- R331
- Genomics168
- Transcriptomics160
- Python149
- RNA-seq127
- Next generation sequencing119
- Data management104
- Bioinformatics98
- Statistics80
- FAIR data77
- Galaxy Server administration68
- Machine learning68
- Reproducibility68
- Data science67
- Single-cell sequencing61
- Unix/Linux61
- Proteomics56
- jupyter-notebook55
- Workflows54
- Data visualization51
- Version control51
- Foundations of Data Science50
- Variant analysis50
- data management48
- biodiversity47
- metagenomics47
- Development in Galaxy45
- Statistics and machine learning45
- Genome assembly43
- Galaxy41
- Single Cell41
- microgalaxy41
- training39
- Metagenomics38
- General36
- Genome annotation36
- Rare Diseases & Research36
- FAIR Data, Workflows, and Research33
- QC33
- Microbiome32
- Nextflow32
- Genome Annotation31
- Ecology30
- programming30
- Assembly28
- FAIR principles28
- Genome28
- Metadata28
- Molecular28
- Alignment27
- Contributing to the Galaxy Training Material27
- Data analysis27
- Phylogenetics27
- Using Galaxy and Managing your Data27
- biohackaton 201827
- Epigenetics26
- Long read sequencing26
- RDM26
- bioinformatics26
- Docker25
- Data reuse24
- Annotation23
- Containerization23
- data stewardship23
- ChIP-seq22
- High performance computing22
- Metabolomics22
- Microbiology22
- Shiny22
- NGS21
- Open Science21
- RNA-Seq21
- Spatial transcriptomics21
- ansible21
- metadata21
- reproducible research21
- BAM20
- FASTQ20
- Research Data Management20
- life-sciences20
- sensitive data19
- CfRR19
- Cloud computing19
- Differential-expression19
- FAIR Data19
- Imaging19
- Pre-processing19
- REDCap19
- Sequence analysis19
- git-gat19
- scientific computing19
- Artificial intelligence18
- Comparative genomics18
- Data sharing18
- Programming18
- Variant Analysis18
- interactive-tools18
- transcriptomics18
- work-in-progress18
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- Competency level
- Beginner33
- Not specified28
- Intermediate8
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- Licence
- Creative Commons Attribution 4.0 International24
- License Not Specified22
- Creative Commons Attribution Share Alike 4.0 International12
- Creative Commons Attribution Non Commercial Share Alike 4.0 International4
- Creative Commons Attribution Non Commercial 4.0 International3
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International3
- GNU General Public License v3.0 only1
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- Target audience
- Researchers10
- Bioinformaticians9
- PhD candidates9
- Life Science Researchers7
- data stewards7
- Researcher in life sciences6
- Scientists6
- Data Managers5
- Data Scientists5
- Research Scientists5
- Biomedical Researchers4
- Students4
- data managers3
- Clinicians2
- Ontologists2
- PhD Students2
- PhD students2
- Post Docs2
- bioinformaticians2
- software developers, bioinformaticians2
- Bioinformaticians, Biologists with little or no prior computational experience.1
- Biomedical researchers1
- ECR1
- General Interest1
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members1
- PhD Students or young researchers in molecular biology and/or genetics with little or no background in bioinformatics.1
- PhD candidate1
- Policy makers1
- Postdocs and Staff members1
- Principal Investigators (PIs)1
- Research scientists1
- Support Staff1
- Technicians1
- The course is aimed at research scientists with a minimum of a degree in a biological discipline, including laboratory and clinical staff, as well as specialists in related fields.1
- This workshop is aimed at PhD students within the PhD programme "Genetics, Molecular and Cellular Biology" (University of Pavia) and the PhD programmme "Biomolecular Sciences and Biotechnology" (IUSS, University School for Advanced Studies Pavia.1
- Undergraduate students1
- biocurators1
- computational scientists1
- data librarians1
- database managers1
- software engineers1
- standard developers1
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- Author
- Personalized Health Informatics Group5
- Daniel Faria3
- Julie Sullivan3
- Mijke Jetten3
- Niclas Jareborg3
- Rachel Lyne3
- Yo Yehudi3
- Christine Staiger2
- Daniela Butano2
- Gos Micklem2
- Gustafsson, Johan2
- Ihsan, Maira2
- Jan Slifka2
- Johan Gustafsson2
- Justin Clark-Casey2
- Kevin Herald Reierskog2
- Paupério, Joana2
- Sergio Contrino2
- Stephan Nylinder2
- Tereza Machačová2
- Vasundra Touré2
- Yvan Le Bras2
- Alexander Botzki1
- Allyson Lister1
- Ana M. P. Melo1
- Ana M.P. Melo1
- Andra Waagmeester1
- Andreas Pippow1
- Ann-Kathrin Bernards1
- Annika Jacobsen1
- Bert Meerman1
- Bruna Piereck1
- Bérénice Batut1
- Carlos Martinez Ortiz1
- Celia W.G. van Gelder1
- Celia van Gelder1
- Claire Toffano-Nioche1
- Clea Siguret1
- Céline Hernandez1
- Deepak Unni1
- Dietmar Hertsen1
- Elin Kronander1
- Erik Schultes1
- Filipa Pereira1
- Franziska Scallan1
- Fuqi Xu1
- Geert van Geest and Wandrille Duchemin1
- Gil Poiares-Oliveira1
- Gildas Le Corguillé1
- Glinez Thibaud1
- Ienasescu, Hans1
- Jana Freeman1
- Jasmin Karoline Böhmer1
- Jorge Oliveira1
- Julien Seiler1
- Kalaš, Matúš1
- Kristin Gnodke1
- Kristin Gnodtke1
- Kristina Hettne1
- Marek Suchanek1
- Marek Suchánek1
- Mark Thompson1
- Marta Lloret Llinares1
- Mascha Jansen1
- Mateusz Kuzak1
- Mattias Strömberg1
- Monique Zahn1
- Nadia Goué1
- Nikola Vasiljevic1
- Olivier Sand1
- Pedro Príncipe1
- Peter McQuilton1
- Price, Gareth1
- Rob Hooft1
- SIB Swiss Institute of Bioinformatics1
- Sabine Österle1
- Samaha, Georgina1
- Sonal Henson1
- Susanna-Assunta Sansone1
- Tanguy Genthon1
- Tereza Machacova1
- Thomas Denecker1
- Vojtěch Knaisl1
- Wandrille Duchemin1
- Yvonne Kallberg1
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- Contributor
- Erik Hedman5
- Markus Englund5
- Wolmar Nyberg Åkerström5
- Elin Kronander4
- Mattias Strömberg4
- Yvonne Kallberg4
- Björn Grüning3
- Helena Rasche3
- Sabine Österle3
- Saskia Hiltemann3
- Stephan Nylinder3
- Marie Josse2
- Munazah Andrabi2
- Niclas Jareborg2
- Yvan Le Bras2
- Alejandra Delfin-Rossaro1
- Alexandra Grebe de Baron1
- Anne Cambon-Thomsen1
- Bérénice Batut1
- Clea Siguret1
- Coline Royaux1
- Dorothy Reilly1
- Emmanuelle Rial-Sebbag1
- Finn Bacall1
- Gareth Price1
- Gauthier Chassang1
- Glinez Thibaud1
- Herman van Vlijmen1
- Hélène Chiapello1
- Ibrahim Emam1
- Jacqueline Ullmann1
- Janina Müller1
- Katarzyna Kamieniecka1
- Khaled Jum'ah1
- Krzysztof Poterlowicz1
- Laurence Mabile1
- Manfred Kohler1
- Md. Rezaul Karim1
- Phil Gribbon1
- Philippe Rocca-Serra1
- Robert Giessmann1
- Severine Duvaud1
- Vassilios Ioannidis1
- Yasmine Maes1
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- Resource type
- Video12
- e-learning12
- Training materials8
- lessons7
- Presentation4
- Slides4
- Documentation3
- E-learning3
- Slidedeck3
- Webinar3
- E-Learning2
- Course materials1
- Metadata Registry1
- Online material1
- PDF1
- Recorded webinar1
- Tutorial1
- hands-on tutorial1
- online course1
- presentation1
- tutorial1
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- Related resource
- The Carpentries4
- Slides3
- Associated Training Datasets2
- Data Stewardship Wizard2
- Workshop recording2
- DMPortal1
- FAIR for busy biologists1
- FAIR in (biological) practice1
- FAIRplus FAIRification wizard1
- OpenRefine1
- RDMkit1
- Recoding1
- elabFTW1
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- Node
- Switzerland20
- Netherlands8
- United Kingdom7
- Czech Republic5
- Sweden5
- EMBL-EBI4
- Portugal3
- Denmark1
- France1
- Germany1
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- Collection
- PINK project8
- ELIXIR SIS-Containers - collection of training materials1
- Elements of Data Management1
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- Status
- Active26
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