Materials - TeSS (Training eSupport System)

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- Scientific topic
- Bottom-up proteomics47
- Discovery proteomics47
- MS-based targeted proteomics47
- MS-based untargeted proteomics47
- Metaproteomics47
- Peptide identification47
- Protein and peptide identification47
- Proteomics47
- Quantitative proteomics47
- Targeted proteomics47
- Top-down proteomics47
- Proteogenomics4
- Taxonomy3
- Biodiversity2
- Community analysis2
- Environmental microbiology2
- Metagenomics2
- Metatranscriptomics2
- Microbial ecology2
- Microbiome2
- Molecular community analysis2
- Shotgun metagenomics2
- Active learning1
- Bioinformatics1
- Biological modelling1
- Biological processes1
- Biological system modelling1
- Cell biology1
- Cells1
- Cellular processes1
- Chromosome walking1
- Clone verification1
- Comparative transcriptomics1
- DNA-Seq1
- DNase-Seq1
- Ensembl learning1
- High throughput sequencing1
- High-throughput sequencing1
- Kernel methods1
- Knowledge representation1
- Machine learning1
- MicroRNA sequencing1
- Molecular biology1
- NGS1
- NGS data analysis1
- Neural networks1
- Next gen sequencing1
- Next generation sequencing1
- Omics1
- Panels1
- Primer walking1
- Protein subcellular localization1
- RNA sequencing1
- RNA-Seq1
- RNA-Seq analysis1
- Recommender system1
- Reinforcement learning1
- Sanger sequencing1
- Sequencing1
- Small RNA sequencing1
- Small RNA-Seq1
- Small-Seq1
- Supervised learning1
- Systems biology1
- Systems modelling1
- Targeted next-generation sequencing panels1
- Transcriptome1
- Transcriptome profiling1
- Transcriptomics1
- Unsupervised learning1
- WTSS1
- Whole transcriptome shotgun sequencing1
- miRNA-seq1
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- Operation
- Data filtering1
- Database retrieval1
- Query1
- Query and retrieval1
- Sequence filtering1
- rRNA filtering1
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- Tool
- Galaxy34
- msConvert5
- MaxQuant4
- Biopython3
- FreeBayes3
- HISAT23
- MSstats3
- StringTie3
- bed to protein map3
- customProDB3
- gffcompare3
- BLAST2
- UniProt2
- metaQuantome2
- Cardinal1
- Datanator1
- EncyclopeDIA1
- FlashLFQ1
- MSstatsTMT1
- OptiType1
- STAR1
- Seq2HLA1
- The Immune Epitope Database (IEDB)1
- Unipept1
- WoLF PSORT1
- diaPASEF1
- ggplot21
- multiGSEA1
- mzToSQLite1
- scp1
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- Standard database or policy
- Datanator1
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- Content provider
- GTN37
- Glittr.org10
- Australian BioCommons3
- ELIXIR Portugal3
- Danish National Health Data Science Sandbox1
- VIB Training & Conferences1
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- Keyword
- Proteomics
- R331
- Genomics168
- Transcriptomics160
- Python149
- RNA-seq127
- Next generation sequencing119
- Data management104
- Bioinformatics98
- Statistics80
- FAIR data77
- FAIR69
- Galaxy Server administration68
- Machine learning68
- Reproducibility68
- Data science67
- Single-cell sequencing61
- Unix/Linux61
- jupyter-notebook55
- Workflows54
- Data visualization51
- Version control51
- Foundations of Data Science50
- Variant analysis50
- data management48
- biodiversity47
- metagenomics47
- Development in Galaxy45
- Statistics and machine learning45
- Genome assembly43
- Galaxy41
- Single Cell41
- microgalaxy41
- training39
- Metagenomics38
- General36
- Genome annotation36
- Rare Diseases & Research36
- FAIR Data, Workflows, and Research33
- QC33
- Microbiome32
- Nextflow32
- Genome Annotation31
- Ecology30
- programming30
- Assembly28
- FAIR principles28
- Genome28
- Metadata28
- Molecular28
- Alignment27
- Contributing to the Galaxy Training Material27
- Data analysis27
- Phylogenetics27
- Using Galaxy and Managing your Data27
- biohackaton 201827
- Epigenetics26
- Long read sequencing26
- RDM26
- bioinformatics26
- Docker25
- Data reuse24
- Annotation23
- Containerization23
- data stewardship23
- ChIP-seq22
- High performance computing22
- Metabolomics22
- Microbiology22
- Shiny22
- NGS21
- Open Science21
- RNA-Seq21
- Spatial transcriptomics21
- ansible21
- metadata21
- reproducible research21
- BAM20
- FASTQ20
- Research Data Management20
- life-sciences20
- sensitive data19
- CfRR19
- Cloud computing19
- Differential-expression19
- FAIR Data19
- Imaging19
- Pre-processing19
- REDCap19
- Sequence analysis19
- git-gat19
- scientific computing19
- Artificial intelligence18
- Comparative genomics18
- Data sharing18
- Programming18
- Variant Analysis18
- interactive-tools18
- transcriptomics18
- work-in-progress18
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- Competency level
- Beginner24
- Intermediate17
- Not specified13
- Advanced2
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- Licence
- Creative Commons Attribution 4.0 International42
- License Not Specified8
- Creative Commons Attribution Share Alike 4.0 International3
- MIT License3
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- Target audience
- Students37
- Academia/ Research Institution3
- Healthcare3
- Industry3
- Non-Profit Organisation3
- Computational biologists1
- bioinformaticians1
- biologists1
- modelers1
- mololecular cell biologists1
- systems biologists1
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- Author
- Subina Mehta16
- James Johnson13
- Björn Grüning8
- Katherine Do8
- Melanie Föll8
- Pratik Jagtap8
- Timothy J. Griffin8
- Florian Christoph Sigloch7
- Matthias Fahrner7
- The Gulbenkian Training Programme in Bioinformatics6
- Praveen Kumar5
- Emma Leith4
- Marie Crane3
- Ray Sajulga3
- Computational Biology and Bioinformatics at UCLouvain2
- Daniel Blankenberg2
- David Christiany2
- Florence Combes2
- Jayadev Joshi2
- Valentin Loux2
- Yves Vandenbrouck2
- Birkinshaw, Richard1
- Carroll, Luke1
- Clemens Blank1
- Delphine Lariviere1
- Galaxy Project1
- Gustafsson, Johan1
- Health Data Science Sandbox1
- Helge Hecht1
- Jonathan Karr1
- Klemens Fröhlich1
- Kristina Gomoryova1
- Leeming, Michael1
- Lennart Martens1
- Matthias Bernt1
- Padula, Matt1
- PickyBinders1
- Thorben Stehling1
- Yosef Roth1
- bioinformatics.ca1
- statOmics1
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- Contributor
- Saskia Hiltemann34
- Björn Grüning27
- Melanie Föll26
- Subina Mehta24
- Helena Rasche19
- Bérénice Batut14
- Nicola Soranzo13
- Pratik Jagtap9
- Armin Dadras8
- Martin Čech8
- Niall Beard8
- Timothy J. Griffin8
- Katherine Do7
- Florian Christoph Sigloch6
- William Durand5
- Clemens Blank4
- Mallory Freeberg3
- Pavankumar Videm3
- The Gulbenkian Training Programme in Bioinformatics3
- Veit Schwämmle3
- lievenclement3
- David Bouyssié2
- Florence Combes2
- Harald Barsnes2
- Jayadev Joshi2
- Laurent Gatto2
- Lennart Martens2
- Lieven Clement2
- Marc Vaudel2
- Amirhossein Naghsh Nilchi1
- Anthony Bretaudeau1
- Anton Nekrutenko1
- Axelle Loriot1
- Canadian Bioinformatics Workshops1
- Cristóbal Gallardo1
- Galaxy Project1
- Helge Hecht1
- Jacob Fredegaard Hansen1
- James Johnson1
- Jay1
- JulieDevis1
- Kristina Gomoryova1
- Lev Levitsky1
- Lucille Delisle1
- Manon Martin1
- Matthias Fahrner1
- Mélanie Petera1
- Pedro L Fernandes1
- Samuele Soraggi1
- Wolfgang Maier1
- npinter1
- phusen1
- skringe1
- zhibinlu1
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- Resource type
- e-learning37
- Documentation3
- Exercise3
- Handout3
- Scripts3
- slides2
- Tutorial1
- scripts1
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- Related resource
- Associated Training Datasets30
- Associated Workflows27
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- Node
- Switzerland10
- Portugal3
- Belgium1
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- Collection
- ELIXIR Systems Biology Community: training events and materials1
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- Status
- Active4
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