- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Exomes30
- Genome annotation30
- Genomes30
- Genomics30
- Personal genomics30
- Synthetic genomics30
- Viral genomics30
- Whole genomes30
- Antimicrobial stewardship8
- Medical microbiology8
- Microbial genetics8
- Microbial physiology8
- Microbial surveillance8
- Microbiological surveillance8
- Microbiology8
- Molecular infection biology8
- Molecular microbiology8
- Biological sequences6
- Sequence analysis6
- Sequence databases6
- Gene and protein families5
- Gene families5
- Gene family5
- Gene system5
- Genes, gene family or system5
- Protein families5
- Protein sequence classification5
- Animal2
- Animal biology2
- Animal genetics2
- Animal physiology2
- Animals2
- Assembly2
- Biodiversity2
- Botany2
- De novo genome sequencing2
- Entomology2
- Genome sequencing2
- Metazoa2
- Mobile genetic elements2
- Plant2
- Plant anatomy2
- Plant biology2
- Plant cell biology2
- Plant ecology2
- Plant genetics2
- Plant physiology2
- Plant science2
- Plants2
- Sequence assembly2
- Transposons2
- WGS2
- Whole genome resequencing2
- Whole genome sequencing2
- Zoology2
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antiprotozoal resistance1
- Antiviral resistance1
- Communicable disease1
- Comparative genomics1
- Epidemiology1
- Extensive drug resistance (XDR)1
- Function analysis1
- Functional analysis1
- Functional genomics1
- Infectious disease1
- Low complexity sequences1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Nucleic acid repeats1
- Pandrug resistance (PDR)1
- Phylogenetic clocks1
- Phylogenetic dating1
- Phylogenetic simulation1
- Phylogenetic stratigraphy1
- Phylogeny1
- Phylogeny reconstruction1
- Protein function analysis1
- Protein function prediction1
- Protein repeats1
- Protein sequence features1
- Protein sequence repeats1
- Protein sites, features and motifs1
- Public health1
- Public health and epidemiology1
- Repeat sequences1
- Sequence complexity1
- Sequence composition1
- Sequence composition, complexity and repeats1
- Sequence repeats1
- Signal peptide cleavage sites1
- Total drug resistance (TDR)1
- Transmissible disease1
- Show N_FILTERS more
-
-
-
Tool
- Galaxy27
- JBrowse12
- BUSCO4
- gffread4
- Apollo3
- OMArk3
- STAR3
- Bakta2
- Bowtie2
- Clustal 1.8 (Clustal W, Clustal X)2
- Cutadapt2
- DeepTools2
- Diamond2
- FastQC2
- GECKO2
- Helixer2
- InterProScan (EBI)2
- MAGeCK2
- MultiQC2
- TRANSIT2
- eggNOG-mapper v22
- tbl2gff32
- AUGUSTUS1
- BEDTools1
- BLAST1
- CheckM1
- FEELnc1
- GAEVAL1
- ISEScan1
- Integron Finder1
- MAFFT1
- MAKER1
- NCBI Datasets1
- NCBI Resources1
- PPanGGOLiN1
- PlasmidFinder1
- RED1
- RapidNJ1
- RepeatMasker1
- RepeatModeler1
- SNAP1
- antiSMASH1
- bx-python1
- chemfp1
- dRep1
- funannotate1
- orfipy1
- staramr1
- Show N_FILTERS more
-
-
-
Content provider
- GTN30
- Australian BioCommons1
- Show N_FILTERS more
-
-
-
Keyword
- Genome Annotation
- R331
- Genomics168
- Transcriptomics160
- Python149
- RNA-seq127
- Next generation sequencing119
- Data management104
- Bioinformatics98
- Statistics80
- FAIR data77
- FAIR69
- Galaxy Server administration68
- Machine learning68
- Reproducibility68
- Data science67
- Single-cell sequencing61
- Unix/Linux61
- Proteomics56
- jupyter-notebook55
- Workflows54
- Data visualization51
- Version control51
- Foundations of Data Science50
- Variant analysis50
- data management48
- biodiversity47
- metagenomics47
- Development in Galaxy45
- Statistics and machine learning45
- Genome assembly43
- Galaxy41
- Single Cell41
- microgalaxy41
- training39
- Metagenomics38
- General36
- Genome annotation36
- Rare Diseases & Research36
- FAIR Data, Workflows, and Research33
- QC33
- Microbiome32
- Nextflow32
- Ecology30
- programming30
- Assembly28
- FAIR principles28
- Genome28
- Metadata28
- Molecular28
- Alignment27
- Contributing to the Galaxy Training Material27
- Data analysis27
- Phylogenetics27
- Using Galaxy and Managing your Data27
- biohackaton 201827
- Epigenetics26
- Long read sequencing26
- RDM26
- bioinformatics26
- Docker25
- Data reuse24
- Annotation23
- Containerization23
- data stewardship23
- ChIP-seq22
- High performance computing22
- Metabolomics22
- Microbiology22
- Shiny22
- NGS21
- Open Science21
- RNA-Seq21
- Spatial transcriptomics21
- ansible21
- metadata21
- reproducible research21
- BAM20
- FASTQ20
- Research Data Management20
- life-sciences20
- sensitive data19
- CfRR19
- Cloud computing19
- Differential-expression19
- FAIR Data19
- Imaging19
- Pre-processing19
- REDCap19
- Sequence analysis19
- git-gat19
- scientific computing19
- Artificial intelligence18
- Comparative genomics18
- Data sharing18
- Programming18
- Variant Analysis18
- interactive-tools18
- transcriptomics18
- work-in-progress18
- Show N_FILTERS more
-
-
-
Competency level
- Beginner20
- Intermediate9
- Advanced1
- Not specified1
- Show N_FILTERS more
-
-
-
Target audience
- Students30
- Show N_FILTERS more
-
-
-
Author
- Anthony Bretaudeau12
- Bérénice Batut6
- Helena Rasche3
- Hélène Chiapello3
- Romane LIBOUBAN3
- Valentin Loux3
- Anna Syme2
- Delphine Lariviere2
- Esteban Perez-Wohlfeil2
- Maria Doyle2
- Mateo Boudet2
- Nathan Dunn2
- Simon Gladman2
- Stéphanie Robin2
- Torsten Seemann2
- Alexandre Cormier1
- Anika Erxleben1
- Anton Nekrutenko1
- Bazante Sanders1
- Björn Grüning1
- Degnan, Bernie1
- Degnan, Sandie1
- Erwan Corre1
- Guillaume Gautreau1
- Jonathan Kreplak1
- Kenji Fujihara1
- Laura Leroi1
- Nelson, Tiffanie1
- Paul Zierep1
- Rane, Rahul1
- Sylvia Mahara1
- Twishi Gulati1
- Voelker, Julia1
- Show N_FILTERS more
-
-
-
Contributor
- Helena Rasche23
- Saskia Hiltemann23
- Anthony Bretaudeau20
- Bérénice Batut19
- Björn Grüning18
- Cristóbal Gallardo5
- Deepti Varshney4
- Nicola Soranzo4
- Simon Bray4
- Stéphanie Robin4
- Niall Beard3
- Romane LIBOUBAN3
- Anna Syme2
- Delphine Lariviere2
- Esteban Perez-Wohlfeil2
- Gildas Le Corguillé2
- Jonathan Kreplak2
- Laura Leroi2
- Paul Zierep2
- Teresa Müller2
- Alexandre Cormier1
- Anton Nekrutenko1
- Bazante Sanders1
- Donny Vrins1
- Ekaterina Polkh1
- Erwan Corre1
- Felicitas Kindel1
- Jasper Ouwerkerk1
- Maria Doyle1
- Miaomiao Zhou1
- Simon Gladman1
- Solenne Correard1
- Tristan Reynolds1
- William Durand1
- pimarin1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning24
- slides6
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets28
- Associated Workflows23
- Show N_FILTERS more
-
-
-
Status
- Active1
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Hide materials with broken links
- Show archived materials
