- Home
- Materials
Filter
Sort
-
-
Filter Clear filters
-
-
Scientific topic
- Community analysis29
- Environmental microbiology29
- Metagenomics29
- Microbial ecology29
- Microbiome29
- Molecular community analysis29
- Shotgun metagenomics29
- Biological sequences15
- Sequence analysis15
- Sequence databases15
- Taxonomy14
- DNA metabarcoding7
- Environmental metabarcoding7
- Metabarcoding7
- RNA metabarcoding7
- eDNA metabarcoding7
- eRNA metabarcoding7
- Assembly4
- Sequence assembly4
- Antimicrobial stewardship2
- Epidemiology2
- Function analysis2
- Functional analysis2
- Medical microbiology2
- Metatranscriptomics2
- Microbial genetics2
- Microbial physiology2
- Microbial surveillance2
- Microbiological surveillance2
- Microbiology2
- Molecular infection biology2
- Molecular microbiology2
- Protein function analysis2
- Protein function prediction2
- Public health2
- Public health and epidemiology2
- AMR1
- Antibiotic resistance (ABR)1
- Antifungal resistance1
- Antimicrobial resistance1
- Antiprotozoal resistance1
- Antiviral resistance1
- Communicable disease1
- Disease1
- Exomes1
- Extensive drug resistance (XDR)1
- Genome annotation1
- Genomes1
- Genomics1
- Infectious disease1
- Metagenomic sequencing1
- Mobile genetic elements1
- Multidrug resistance1
- Multiple drug resistance (MDR)1
- Multiresistance1
- Pandrug resistance (PDR)1
- Pathology1
- Personal genomics1
- Shotgun metagenomic sequencing1
- Synthetic genomics1
- Total drug resistance (TDR)1
- Transmissible disease1
- Transposons1
- Viral genomics1
- Whole genomes1
- Show N_FILTERS more
-
-
-
Tool
- Galaxy25
- taxonomy_krona_chart10
- FastQC7
- MultiQC6
- MetaPhlAn5
- Cutadapt4
- KrakenTools4
- fastp4
- kraken24
- GraPhlAn3
- Newick Utilities3
- SortMeRNA3
- export2graphlan3
- humann3
- mothur3
- BEDTools2
- BamTools2
- Bandage2
- Bowtie 22
- Combine Metaphlan and HUMAnN2
- HUMAnN22
- MaxQuant2
- Minimap22
- NanoPlot2
- UniProt2
- dRep2
- ggplot22
- lotus22
- ABRicate1
- BCFtools1
- Bakta1
- Bioconductor1
- Bracken1
- CONCOCT1
- CheckM1
- Clair31
- Clustal 2 (Clustal W, Clustal X)1
- CoverM1
- FASTX-Toolkit1
- FastTree1
- Flye1
- Infernal1
- Krona1
- MAPseq1
- MEGAHIT1
- MLST1
- MSstats1
- MaxBin1
- Medaka1
- MetaBAT 21
- MetaNovo1
- NGSUtils1
- PRINSEQ1
- QUAST1
- Racon1
- SAMtools1
- SRA Software Toolkit1
- SeqPrep1
- Trimmomatic1
- Unicycler1
- Unipept1
- ampvis1
- biomformat1
- bx-python1
- cmsearch-deoverlap1
- dada21
- dastool1
- metaspades1
- miniasm1
- msConvert1
- phyloseq1
- seqtk1
- staramr1
- Show N_FILTERS more
-
-
-
Content provider
- GTN29
- Australian BioCommons1
- Bioconductor1
- Pattern Institute1
- Show N_FILTERS more
-
-
-
Keyword
- Microbiome
- R331
- Genomics169
- Transcriptomics161
- Python149
- RNA-seq128
- Next generation sequencing119
- Data management104
- Bioinformatics99
- Statistics80
- FAIR data78
- FAIR69
- Galaxy Server administration68
- Machine learning68
- Reproducibility68
- Data science67
- Unix/Linux62
- Single-cell sequencing61
- Proteomics56
- Workflows56
- jupyter-notebook55
- Data visualization52
- Version control52
- Foundations of Data Science50
- Variant analysis50
- data management48
- biodiversity47
- metagenomics47
- Development in Galaxy45
- Statistics and machine learning45
- Genome assembly43
- Galaxy41
- Single Cell41
- microgalaxy41
- Metagenomics39
- training39
- General36
- Genome annotation36
- Rare Diseases & Research36
- FAIR Data, Workflows, and Research33
- QC33
- Nextflow32
- Genome Annotation31
- Ecology30
- programming30
- Assembly28
- FAIR principles28
- Genome28
- Metadata28
- Molecular28
- Alignment27
- Contributing to the Galaxy Training Material27
- Data analysis27
- Phylogenetics27
- Using Galaxy and Managing your Data27
- biohackaton 201827
- Epigenetics26
- Long read sequencing26
- RDM26
- bioinformatics26
- Docker25
- Data reuse24
- High performance computing24
- Annotation23
- Containerization23
- data stewardship23
- ChIP-seq22
- Metabolomics22
- Microbiology22
- Shiny22
- Spatial transcriptomics22
- NGS21
- Open Science21
- RNA-Seq21
- ansible21
- metadata21
- reproducible research21
- BAM20
- FASTQ20
- Imaging20
- Research Data Management20
- life-sciences20
- sensitive data19
- CfRR19
- Cloud computing19
- Differential-expression19
- FAIR Data19
- Pre-processing19
- REDCap19
- Sequence analysis19
- git-gat19
- scientific computing19
- Artificial intelligence18
- Comparative genomics18
- Data sharing18
- Programming18
- Variant Analysis18
- interactive-tools18
- transcriptomics18
- work-in-progress18
- Show N_FILTERS more
-
-
-
Competency level
- Beginner28
- Intermediate2
- Not specified2
- Show N_FILTERS more
-
-
-
Author
- Bérénice Batut15
- Saskia Hiltemann8
- Subina Mehta8
- Paul Zierep7
- Dechen Bhuming5
- Katherine Do5
- Pratik Jagtap3
- Dave Clements2
- Emma Leith2
- Engy Nasr2
- Polina Polunina2
- Praveen Kumar2
- QIIME22
- Ray Sajulga2
- Sophia Hampe2
- Vini Salazar2
- Charlotte Soneson1
- Cristóbal Gallardo1
- David Palecek1
- Didier Debroas1
- Dungan, Ashley1
- Fabio Cumbo1
- Fotis E. Psomopoulos1
- Geissler, Laura1
- Ismail, Rania1
- Makunin, Igor1
- Mina Hojat Ansari1
- Nadia Goué1
- Nikos Pechlivanis1
- Perry, Andrew1
- Philip, Gayle1
- Rand Zoabi1
- Siyu Chen1
- Sujai Kumar1
- Tandon, Kshitij1
- Tania Aires1
- Teresa Müller1
- Willem de Koning1
- Show N_FILTERS more
-
-
-
Contributor
- Saskia Hiltemann21
- Bérénice Batut17
- Helena Rasche15
- Björn Grüning12
- Paul Zierep12
- Cristóbal Gallardo6
- Deepti Varshney5
- Pratik Jagtap5
- Timothy J. Griffin5
- Natalie Whitaker-Allen4
- Teresa Müller4
- Engy Nasr3
- Nicola Soranzo3
- Tristan Reynolds3
- William Durand3
- Anna Syme2
- Christine Oger2
- Igor Makunin2
- Michael Thang2
- Niall Beard2
- Willem de Koning2
- Armin Dadras1
- Beatriz Serrano-Solano1
- Bert Droesbeke1
- Bethan Manley1
- Clea Siguret1
- Daniel Blankenberg1
- Gildas Le Corguillé1
- Giuseppe Defazio1
- Hans-Rudolf Hotz1
- Linelle Abueg1
- Matthias Bernt1
- Nate Coraor1
- Nikos Pechlivanis1
- Nuwan Goonasekera1
- Polina Polunina1
- Santino Faack1
- Siyu Chen1
- Sophia Hampe1
- Subina Mehta1
- Sujai Kumar1
- Tarnima Omara1
- Vini Salazar1
- Wolfgang Maier1
- mmiladi1
- Show N_FILTERS more
-
-
-
Resource type
- e-learning27
- slides2
- Tutorial1
- Show N_FILTERS more
-
-
-
Related resource
- Associated Training Datasets25
- Associated Workflows24
- Show N_FILTERS more
-
-
-
Status
- Active2
- Show N_FILTERS more
-
- Show materials from all spaces
- Show disabled materials
- Hide materials with broken links
- Show archived materials