Training eSupport System
  • Log In
    • Log in with LS Login
    • Login
    • Register
  • About
  • Events
  • Materials
  • e-Learning
  • Workflows
  • Collections
  • Learning paths
  • Directory
    • Providers
    • Nodes
    • Spaces

TeSS makes use of some necessary cookies to provide its core functionality. Additionally, we make use of Google Analytics to discover how people are using TeSS in order to help us improve the service. To opt out of this, choose the "Allow necessary cookies" option.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies Allow all cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month
    • Scientific topic
    • Pipelines4
    • Software integration4
    • Tool integration4
    • Tool interoperability4
    • Workflows4
    • MicroRNA sequencing3
    • RNA sequencing3
    • RNA-Seq3
    • RNA-Seq analysis3
    • Small RNA sequencing3
    • Small RNA-Seq3
    • Small-Seq3
    • Transcriptome profiling3
    • WTSS3
    • Whole transcriptome shotgun sequencing3
    • miRNA-seq3
    • Comparative transcriptomics2
    • Metagenomics2
    • Shotgun metagenomics2
    • Transcriptome2
    • Transcriptomics2
    • Bioinformatics1
    • Breakend assembly1
    • Comparative genomics1
    • DNA methylation1
    • Data management1
    • Data rendering1
    • Data visualisation1
    • Epigenetics1
    • FAIR data1
    • Findable, accessible, interoperable, reusable data1
    • Functional genome annotation1
    • Genome annotation1
    • Genome assembly1
    • Genomic assembly1
    • Histone modification1
    • Metadata management1
    • Metagenome annotation1
    • Methylation profiles1
    • Research data management (RDM)1
    • Sequence assembly (genome assembly)1
    • Structural genome annotation1
    • Variant pattern analysis1
    • Show N_FILTERS more
    • Tool
    • BioContainers1
    • Bioconductor1
    • DESeq1
    • Enrichr1
    • FastQC1
    • GSEA1
    • MultiQC1
    • Nextflow1
    • QualiMap1
    • RStudio1
    • SAMtools1
    • STAR1
    • Salmon1
    • Trim Galore1
    • UCSC Genome Browser1
    • biomaRt1
    • ggplot21
    • nf-core-rnaseq1
    • Show N_FILTERS more
    • Content provider
    • Glittr.org5
    • Centre for Genomic Regulation (CRG)1
    • Show N_FILTERS more
    • Keyword
    • Nextflow
    • Python32
    • R30
    • Unix/Linux13
    • Genomics12
    • Statistics12
    • Machine learning11
    • RNA-seq11
    • Transcriptomics11
    • General10
    • Reproducibility10
    • Data science9
    • Data visualization8
    • Next generation sequencing8
    • Single-cell sequencing8
    • Variant analysis7
    • Shiny6
    • Julia5
    • Version control5
    • Data management4
    • Genome annotation4
    • Genome assembly4
    • Workflows4
    • ATAC-seq3
    • Artificial intelligence3
    • Epigenetics3
    • Metagenomics3
    • Population genetics3
    • Proteomics3
    • ChIP-seq2
    • Comparative genomics2
    • Computational modelling2
    • FAIR data2
    • GA4GH2
    • Genetic Engineering2
    • GitHub2
    • Kinetic modeling2
    • Metabolomics2
    • Molecular biology2
    • Open Science2
    • Security2
    • Spatial transcriptomics2
    • crosslink2
    • discrete-event simulation2
    • genomics2
    • 16S1
    • Annotation1
    • Assembly Evaluation1
    • Automated testing1
    • BIoinformatics1
    • BiologicalMacromolecules1
    • Biomodelling1
    • COMBINE1
    • CWL1
    • Cloning1
    • Command-line1
    • Computational research1
    • ComputationalBiology1
    • Containerization1
    • Containers1
    • DES1
    • DNA damage1
    • DNA engineering1
    • DNA repair1
    • Data Science1
    • Data analysis1
    • ELIXIR1
    • Excel1
    • GNU Make1
    • Galaxy1
    • Git1
    • HPC1
    • Health Services1
    • High performance computing1
    • Image analysis1
    • Large language models1
    • Linux1
    • Long read sequencing1
    • Microbiology1
    • Microbiome1
    • Model1
    • Modeling1
    • Open Access1
    • Open Source Software1
    • Open source code1
    • Protein structure1
    • Python for Data Analysis1
    • Qiime21
    • Quarto1
    • R Programming1
    • RAP1
    • RNA modification1
    • RStudio1
    • Reproducible Analytical Pipeline1
    • Reproducible Environment1
    • Reproducible Research1
    • Reproducible Science1
    • Rmarkdown1
    • Rust1
    • SED-ML1
    • Show N_FILTERS more
    • Competency level
    • Not specified5
    • Beginner1
    • Show N_FILTERS more
    • Licence
    • MIT License
    • License Not Specified12
    • Creative Commons Attribution 4.0 International11
    • GNU General Public License v3.0 only2
    • Apache License 2.01
    • Show N_FILTERS more
    • Target audience
    • Biologists interested in learning about RNA-seq1
    • Show N_FILTERS more
    • Author
    • Sydney Informatics Hub2
    • Andrea Telatin1
    • Anna Delgado Tejedor1
    • CRUK CI Bioinformatics Core1
    • Fabian Andrade Lozano1
    • Genome Informatics Facility1
    • Julia Ponomarenko1
    • Luca Cozzuto1
    • Sarah Bonnin1
    • Toni Hermoso Pulido1
    • Show N_FILTERS more
    • Contributor
    • Georgie Samaha2
    • Aleksandra E. Badaczewska-Dawid1
    • Andrea Telatin1
    • Andrew Severin1
    • Antonia Taiani1
    • Arun Seetharam1
    • Bryan1
    • Chris Hakkaart1
    • Christopher Bottoms1
    • Code by Gina1
    • Ephantus Wambui1
    • Fernando Cejas1
    • Giacomo Lawrance1
    • GitBook Bot1
    • Gordon McDonald1
    • Jennifer Chang1
    • Lenin Alberto1
    • Maryam1
    • Matt Eldridge1
    • Matt O'Keefe1
    • Nandan Deshpande1
    • Rebecca1
    • Richard Bowers1
    • Rick Masonbrink1
    • Sharu Paul Sharma1
    • Siva Chudalayandi1
    • Tayab Soomro1
    • Tomer Ben David1
    • VSatheesh1
    • calizilla1
    • hsiao yi1
    • margaretwoodhouse1
    • rscipher0011
    • sm301
    • usha-m1
    • Show N_FILTERS more
    • Resource type
    • Course materials1
    • Training materials1
    • Show N_FILTERS more
    • Node
    • Switzerland5
    • Spain1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Show materials from all spaces
  • Show disabled materials
  • Hide materials with broken links
  • Show archived materials

Training materials

  • Subscribe via email

Email Subscription

Register training material

Keywords: Nextflow

and Licence: MIT License

and Include broken links: true

6 materials found
  • Training materials, Course materials

    RNA-seq Bioinformatics Course

    ELIXIR node event
    • Beginner
    RNA-Seq Transcriptomics Bioinformatics FAIR data Workflows RNA-seq BIoinformatics Transcriptomics nf-co.re Nextflow …
  • Sydney-Informatics-Hub/rnaseq-workshop-2023

    ELIXIR node event
    RNA-Seq RNA-seq Nextflow R
  • Sydney-Informatics-Hub/customising-nfcore-workshop

    ELIXIR node event
    Workflows Nextflow Workflows
  • bioinformatics-core-shared-training/nextflow_september_2021

    ELIXIR node event
    Workflows Workflows Nextflow
  • telatin/microbiome-bioinformatics

    ELIXIR node event
    Metagenomics General Metagenomics Unix/Linux Data science Nextflow
  • ISUgenomics/bioinformatics-workbook

    ELIXIR node event
    Workflows Data management Comparative genomics Epigenetics Metagenomics Transcriptomics Data visualisation Genome annotation Genome assembly RNA-Seq …
Training eSupport System
[email protected]
Contribute
About TeSS
Browse Spaces
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation
Bioschemas testing tool

TeSS has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No. 676559.